Conserved Protein Domain Family
RRM_Ssp2_like

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cd12419: RRM_Ssp2_like 
RNA recognition motif (RRM) found in yeast sporulation-specific protein 2 (Ssp2) and similar protein
This subfamily corresponds to the RRM of the lineage specific yeast sporulation-specific protein 2 (Ssp2) and similar proteins. Ssp2 is encoded by a sporulation-specific gene necessary for outer spore wall assembly in the yeast Saccharomyces cerevisiae. It localizes to the spore wall and may play an important role after meiosis II and during spore wall formation. Ssp2 contains one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain).
Statistics
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PSSM-Id: 409853
Aligned: 6 rows
Threshold Bit Score: 94.4989
Created: 7-Jun-2012
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q08646       290 QTLENIdIQELEKDFqnFGEVLEITPIVSRK------LCVSIFFYDIsSAMRAMEeye--------------qkGSYLYN 349 Saccharomyces c...
NP_983537    295 SHICDLnVQELKKDFsqFGNILDISPMISRK------LCVQINFYDIkSAMDALQsyk--------------naNSPLNR 354 Ashbya gossypii...
XP_002617490 246 NFSNDFdAESVKWDFhrFGTIVEIMPVISKK------LSVSIQFADIrSAVMAKKafd--------------kkESAFAH 305 Clavispora lusi...
BAD42342     435 VLPSTT-LNMLRDVFtsYGEIADICFPSDEGgvfentLSARIFFREIkAAKRAIEtlhnvtvkalstkspcpdrHIPLHV 513 Nannochloris ba...
O59784       226 GLPDDFdDRELSGIFt-FCEGYDFSKIESENg----hRKAIVYFRNAiAALKAKNml----------------nASSTNN 284 Schizosaccharom...
EGG00088      23 VLPSVS-VHDLSDYFsvAGEVVDVQPLSSFRsd---sHQYKIRFAEPrMAQCALHtl----------------dGTSLHG 82  Melampsora lari...
Q08646       350 KYf---------kTWTIWYGKDi----------TDQPCI 369 Saccharomyces cerevisiae S288c
NP_983537    355 KYa---------eSWTIGYGKDi----------TDKPCV 374 Ashbya gossypii ATCC 10895
XP_002617490 306 KYs----------AWALKYARDp----------TNKPCF 324 Clavispora lusitaniae ATCC 42720
BAD42342     514 YYit--------pTNSVWVGNLlhtvteqalmeTFSPFG 544 Nannochloris bacillaris
O59784       285 FTiiqr---dvvrQQENEYHKGip--------pLTTPSL 312 Schizosaccharomyces pombe 972h-
EGG00088      83 CKiktmaiqdedtDTSHCSHRAgsp------ssLDQLSL 115 Melampsora larici-populina 98AG31
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