Conserved Protein Domain Family
RRM2_RRT5
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cd12410: RRM2_RRT5 
RNA recognition motif 2 (RRM2) found in yeast regulator of rDNA transcription protein 5 (RRT5) and similar proteins
This subfamily corresponds to the RRM2 of the lineage specific family containing a group of uncharacterized yeast regulators of rDNA transcription protein 5 (RRT5), which may play roles in the modulation of rDNA transcription. RRT5 contains two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Links
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Statistics
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PSSM-Id: 409844
Aligned: 11 rows
Threshold Bit Score: 130.899
Created: 29-Mar-2012
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
C8Z7W7       132 AADTVYCHDLPddITDSEIRELFQLYsPQEIWIYRSKvyrrkc-ipfapHQITAALVTLQSEtpigdICDSVAKTATLrG 210 Saccharomyces c...
Q75AP6       186 SKVTIYVGRLPgrTTDKDLRTYFHEYlPQEIIVFKHRqfrg----wrirRHVTAAVITFPDHer-qeSALESLSNLPFnG 260 Ashbya gossypii...
Q6CQM2       229 SETIAFIGFIPrnTTDNQLREYFKGFdPQEIVVFKNRtyrrg---ftfhRHFTAALVTFPDAfr-lnDAKQFATQEKFrG 304 Kluyveromyces l...
EGV62077     135 STDTVYIVKIKadSTDNQIREFFQDYsPQEVFVFTERakkr----glfsRNHKSALVSLKTEkl-leEVIGSLKGKALnG 209 Candida tenuis ...
Q6BW07       168 SNDTIFIGNAVdkTVDKDVREFFKDYyPTQVFIFRGAnqkrmqrtislrQKTVSVLVTLKKEed-lsKAISELNSKKLnG 246 Debaryomyces ha...
Q6FVV7       181 SEDTVYCAFLPkeTTDNDLRNYFTDYgSREIWIFRTKnvsnsr-frfrnRNHTAALVTLSTElp-lnKVIEELLGKKLlG 258 Candida glabrat...
B9W9A9       155 SMDTIMIQKVHgkVTDESLKDFFKEYnPSQIYIFKSKkpkln--pmnltGSHVNVLVKLDVTqtkldEIISNLRSQKMnG 232 Candida dublini...
C5DHJ1       150 SKDTVYCAYLPskVTDVELREFFADYqPQDIYVYRTNgsrrk---vyfhRRFTAALVTLGGEae-laNAIETLGTRRLmG 225 Lachancea therm...
A7TQR2       180 SDDTVYCGYLPknTTDADLREHFKDYnPQEIWIFRTRaakgpm-hlqlhRHYTAALITLNSPet-iaKIAEVTSTKKIlG 257 Vanderwaltozyma...
CCG21248     127 AKNRILISNVRgnITEVRIEHFLKDYnPSNIYICKNKksimn--pmkltSSYFSVLATIDSPtkkfdEIIKSLKSKKLnG 204 Candida orthops...
XP_022466982 179 ADDTLYAHILPegTEDPNLREFFKGFgPTEIWVFQRYekrhc--lpypkGPFISALVTLPDYkgkldEAIEQLREKELfG 256 Kazachstania na...

C8Z7W7       211 KSIIVKPAYVSKIQEI 226 Saccharomyces cerevisiae EC1118
Q75AP6       261 RTVRMAPAFEDKLAEI 276 Ashbya gossypii ATCC 10895
Q6CQM2       305 KQINVKNAFIEKIEEV 320 Kluyveromyces lactis NRRL Y-1140
EGV62077     210 KKVELKAAFMPKVRKV 225 Candida tenuis ATCC 10573
Q6BW07       247 RAVYLKAAHLSKIEEV 262 Debaryomyces hansenii CBS767
Q6FVV7       259 TKISIKPAYIYKINEV 274 Candida glabrata CBS 138
B9W9A9       233 RYISMKPAYKSKVLEV 248 Candida dubliniensis CD36
C5DHJ1       226 KKITLRPARLSKVEEV 241 Lachancea thermotolerans CBS 6340
A7TQR2       258 KKISVKPAYISKIQEV 273 Vanderwaltozyma polyspora DSM 70294
CCG21248     205 RRVELKPATPDEIKEI 220 Candida orthopsilosis Co 90-125
XP_022466982 257 EKVVFKPATISKLEEV 272 Kazachstania naganishii CBS 8797
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