Conserved Protein Domain Family
RRM2_RBM34
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cd12395: RRM2_RBM34 
RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins
This subfamily corresponds to the RRM2 of RBM34, a putative RNA-binding protein containing two RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains). Although the function of RBM34 remains unclear currently, its RRM domains may participate in mRNA processing. RBM34 may act as an mRNA processing-related protein.
Links
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Statistics
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PSSM-Id: 409829
Aligned: 38 rows
Threshold Bit Score: 99.8793
Created: 3-Oct-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P42696        288 SVFVGNLPYkvEESAIEKHFLdcg-------------------simAVRIVRDKmtgiGKGFGYVLFEn--tDSVHLALK 346  human
17539754      247 AIFVGNLPFeiTEDALITFFSaqig------------------pveAVRIVRDKdtgkGKGFAFVNFKq--dSSVSLALS 306  Caenorhabditi...
Q08208        280 SIFVGNLDFeeIEESLWKHFEpcg-------------------dieYVRIIRDSktnmGKGFAYVQFKd--lQSVNKALL 338  Saccharomyces...
EEC12563      152 SVFVGNLPHevQDEELWNCFSecg-------------------qvtGVRVIRDRetgmGKGFGFVTFSk--lDAAALALE 210  black-legged ...
EEY53230      183 SVFIGNVPFkcTDEQIFQFFLkrlksdd------------epepieNVRLIRDResglGKGFGYLLLKt--pALVAKTLT 248  Phytophthora ...
XP_002954558  873 SVFVGNLHFqvTDEELIELVLgqaamhp-----------eltdaveAVRVVRDRentvGKGFAFVLLKt--kEAARAALS 939  Volvox carter...
EGN93820      374 SVFVGNLDFasKEEDLRVFFEgivsaergapdgetdvgeklkswvtRVRIVRDKdtqlGKGFAYVQFAdrecVDEVLALE 453  Serpula lacry...
GAA99713      344 TCYVGNLDFaqDEEGIRKVFEdllraerga-------ppagkpyveSVRVVRDRdtglGKGFAYVLLHd--eDCVDEMFA 414  Mixia osmunda...
OUS42795      256 SVFLGHLPFnvDDEDVIRLFNkneeype------------lrksveAVRVVRDRkttmGKGIGFVLFKt--kEQARTALL 321  Ostreococcus ...
CEO95787      203 CVFVGNLPFdiAEDELFDLFSvcg-------------------pieFVRCIRDRasnvGKGFAFVQMKv--aKDVKPALA 261  Plasmodiophor...

P42696        347 Lnn---------------seLMGRKLRVM 360  human
17539754      307 Met---------------ikMEKRDLRIT 320  Caenorhabditis elegans
Q08208        339 LnekpmksqkqedentkkptKKARKLRVS 367  Saccharomyces cerevisiae S288c
EEC12563      211 Msg---------------ihMSGRPIRGG 224  black-legged tick
EEY53230      249 Lrn---------------lkMETRELRVQ 262  Phytophthora infestans T30-4
XP_002954558  940 Lng---------------qlLRNRPLRVT 953  Volvox carteri f. nagariensis
EGN93820      454 Egk---------------lkFAKRKLRVQ 467  Serpula lacrymans var. lacrymans S7.3
GAA99713      415 Ieas-------------kvkVSKRKVRLE 430  Mixia osmundae IAM 14324
OUS42795      322 Ldg---------------skLGDREIRVT 335  Ostreococcus tauri
CEO95787      262 Fhe---------------ttFRNRALRVF 275  Plasmodiophora brassicae
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