Conserved Protein Domain Family
RRM3_RBM45

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cd12368: RRM3_RBM45 
RNA recognition motif 3 (RRM3) found in RNA-binding protein 45 (RBM45) and similar proteins
This subfamily corresponds to the RRM3 of RBM45, also termed developmentally-regulated RNA-binding protein 1 (DRB1), a new member of RNA recognition motif (RRM)-type neural RNA-binding proteins, which expresses under spatiotemporal control. It is encoded by gene drb1 that is expressed in neurons, not in glial cells. RBM45 predominantly localizes in cytoplasm of cultured cells and specifically binds to poly(C) RNA. It could play an important role during neurogenesis. RBM45 carries four RRMs, also known as RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains).
Statistics
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PSSM-Id: 409803
Aligned: 16 rows
Threshold Bit Score: 113.162
Created: 18-Nov-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8IUH3        248 KRLSVVSRVPFtEEQLFSIFDIVPGLEYCEVQRDpys--nyGHGVVQYFnvaSAIYAKYKLHGFQYPpg--nRIGVS 320  human
XP_002953712  310 QRLFVVVHKSVtQDVLARLFRKFNGMEYCDLKKDpatgrskGFCFVNYStpeAAATAVAQLNGIEFPphsnqRLKVM 386  Volvox carteri f...
NP_647887     267 SCLEVNVSNCVnQDQLWRLFDIIPGLDYCQIMREhgp--rtNEALVVYDnpeAAIYAKDKLHGLEYPmg--eRIIVK 339  fruit fly
NP_001080090  246 KRLIVVSRLPMiQEQVHNLFDLIPGLEYCEVQRDpyn--sfGHAIVQYQnisSAIYAKYKLHGFEYPpg--nRLGVT 318  African clawed frog
EFN52169      311 TRLFVVVHKSVgDEALSRIFRAFPGMEYCDLKKDrlsgrskGYCYVSYAapeSAAAAQAQLNGVEFPpgsgyKLKVM 387  Chlorella variab...
EAL62755     1258 QRLFVVCHKSIsQENLYRLFSRYPGMEYCDLKKDkntgkskGFAYVNYSspqAALLAKNDLNGIKYPts--hTLKVV 1332 Dictyostelium di...
EFX90035      236 SRLAVVASSSVnQDQLWKLFDIIPGLDYCEKRETknrqqgrCQYTAVYNnaqAASYAKEKLHGFEYPpg--qRLIVK 310  common water flea
NP_001120874  234 RCLMVSSRVSVsQEQIYSLFDLIPGLDYCEIQRDqyg-fskGQVVVRYSnlgSAVYAKEKLNGFEYPpg--nRLSVS 307  zebrafish
XP_002586890  168 QWLYIIVDSTVsEHQLHALFDLIPGLEFVDLQKDrstgqsrGCAYARYTtaaSAIYAREKLNGFEYPpg--fKLLFA 242  Florida lancelet
XP_006012349  244 KCLSVASRVCLtQEQLFNLFDLIPGLEYCEVQRDpysgynkGQALVRYNnvaSAIYAREKLHGFDYPpg--nMLVVT 318  coelacanth
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