Conserved Protein Domain Family

cd12269: RRM_Vip1_like 
RNA recognition motif (RRM) found in a group of uncharacterized plant proteins similar to fission yeast Vip1
This subfamily corresponds to the Vip1-like, uncharacterized proteins found in plants. Although their biological roles remain unclear, these proteins show high sequence similarity to the fission yeast Vip1. Like Vip1 protein, members in this family contain an N-terminal RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain).
PSSM-Id: 409712
Aligned: 5 rows
Threshold Bit Score: 114.941
Created: 7-Jun-2012
Updated: 25-Oct-2021
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
ABR17311      12 VQVMNLspnatEQHVRDFFshsgtieSVELErageeaQVAFVTFKepyAVETAVLmsgativdqRVCIV 80  Sitka spruce
NP_199498      6 VKVSNVsleatERDLKEFFsfsgdiaYLETQsendgsKLAYVTFKdlqGAETAVLltgstivdsSVTVT 74  thale cress
AAF43934       9 VEVTGLspsvtHNDLIDFFsfsgtiqDIDIVrsgeqaCTAYVMFKdsySQETAVLltgatildqRVCIT 77  thale cress
NP_568522      7 VQVNNVsdlatEREIHEFFsfsgdieHIEIQkefgqsRIAFVTFTdpkALEIALLlsgativdqIVTIT 75  thale cress
XP_019578736   6 VEVKNVsdlatEREIHEFFsfsgdidHIEILkeagnsRIAFVTFNdpkALEIALLlsgativdkIVTIT 74  Chinese rufous horseshoe bat
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