Conserved Protein Domain Family
RRM_Vip1
?
cd12268: RRM_Vip1 
RNA recognition motif (RRM) found in fission yeast protein Vip1 and similar proteins
This subfamily corresponds to Vip1, an RNA-binding protein encoded by gene vip1 from fission yeast Schizosaccharomyces pombe. Its biological role remains unclear. Vip1 contains an N-terminal RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain).
Links
?
Statistics
?
PSSM-Id: 240714
Aligned: 5 rows
Threshold Bit Score: 101.841
Created: 7-Jun-2012
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
ACZ59456   8 VHVSNIAptTGESQLHDFFTFCGKIqSIDYKe--------KTATIYFEksSAAKTALMLnggtLDGSRLEVT 71  oyster mushroom
P87216     5 VIVTNISpeVTEKQISDFFSFCGKVsNISTEksg----etQTAKIQFErpSATKTALLLqdalLGQNKIQIT 72  fission yeast
EAA31214   4 VYVKNIGanTEEKDIRAFFSFCGKIsSLDVTteg----etKSATVTFEkeSAARTALLLdhtkLGEHELSVT 71  Neurospora crassa OR74A
EAL61861   7 VYVSNISlkANTKTVSDFFSFCGRIvNLFLRndpt--gssQQAIVVFEsdSAAKTALLLtnalIVDKVIQVV 76  Dictyostelium discoideum AX4
EGX46626   8 VHVSNISskTTEKEIRDFFSFCGKIkEFSSTpasgdanasLTAAITFEqpSAARTALLLdntqLSGVPIQVS 79  Arthrobotrys oligospora ATC...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap