Conserved Protein Domain Family
RRM1_RBM26_like

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cd12257: RRM1_RBM26_like 
RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding protein 26 (RBM26) and similar proteins
This subfamily corresponds to the RRM1 of RBM26, and the RRM of RBM27. RBM26, also known as cutaneous T-cell lymphoma (CTCL) tumor antigen se70-2, represents a cutaneous lymphoma (CL)-associated antigen. It contains two RNA recognition motifs (RRMs), also known as RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains). The RRMs may play some functional roles in RNA-binding or protein-protein interactions. RBM27 contains only one RRM; its biological function remains unclear.
Statistics
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PSSM-Id: 409702
Aligned: 28 rows
Threshold Bit Score: 83.38
Created: 13-Sep-2011
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5T8P6        531 NTKLELRKVPpelnNISKLNEHFSRFGtLVNLQVAyngdpEGALIQFAtyeEAKKAISSteavlNNRFIKVYWH 604  human
EAA33049      334 KSTIVVENIPeenfDEEQVRGFFSQFGnILEVSMQpy--kRLAIVKYDnwaSANAAYKSpkvvfDNRFVKIFWY 405  Neurospora crassa O...
CCD76095      554 RTTLYIDRLPwklnDADKIREHFSQFGhVINVIARykgmvGSAVVEFSssdEAEKAYRSpipmfSNRFIRIYTR 627  Schistosoma mansoni
Q5K9T5        242 KTTLLITDIPdanmSVVAIRNYFQQFGtITSVALEgr--gNRALVSFAsnlEAYKAWKSdeavfGNRRVKVLWH 313  Cryptococcus neofor...
XP_001729043  293 QDTIVIENIPsenlELVHVNDYFKRFGtITNIEVDkp--nKKALVTYAtpaEADQAHKSpdvifGNRFVKVYFQ 364  Malassezia globosa ...
CBK24113       42 FRCVQVKNIPagnlRIASLAKHFQYYGdITNITLDea--qHSAVVQFEhskAAYAALRShsavfKNRFVIVEPL 113  Blastocystis hominis
XP_001645787  160 KNSIIISNIPkdcyYIGKVFRQFKFYGiITNSKLLkd-dnNSAVVQFKkesAAAALYNStvpffNNRFVRIDYY 232  Vanderwaltozyma pol...
XP_001313240   12 GKMLELTNVPdqsnDIGTISKHFSAFGdISSIYIGs----NRAEIKFMntnSLENAINSskpfaNNRLVKFHSL 81   Trichomonas vaginal...
EAX94942       11 CDTLFVYNIPenknKILLLFKHFKHYGhIKSIWCNq----KVATISYStveEATKAFHSpeayeNNRFVMIKYH 80   Trichomonas vaginal...
EAY22448        5 SQVIFIDNIPhdacNIPQLCQHFSKYGrIVGISISen--kTSAQIIYNtrdEAKKVVSStepyaNNRFVNISFH 76   Trichomonas vaginal...
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