Conserved Protein Domain Family
SH3_D21-like

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cd12142: SH3_D21-like 
Src Homology 3 domain of SH3 domain-containing protein 21 (SH3D21) and similar proteins
N-terminal SH3 domain of the uncharacterized protein SH3 domain-containing protein 21, and similar uncharacterized domains, it belongs to the CD2AP-like_3 subfamily of proteins. The CD2AP-like_3 subfamily is composed of the third SH3 domain (SH3C) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3C of both proteins have been shown to bind to ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 213018
Aligned: 5 rows
Threshold Bit Score: 88.2911
Created: 15-Jun-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putativeputative
Feature 1:putative ubiquitin interaction site [polypeptide binding site]
Evidence:
  • Comment:based on the structure of human CIN85 SH3C domain complexed with ubiquitin
  • Comment:Ubiquitin competes with ligands for binding despite the lack of proline residues in ubiquitin at its SH3-binding interface.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ######## ##   ##            ####         ## # ## # 
A4FU49        69 VYRVLFDYQPEAPDELALRRGDVVKVLSKtteDKGWWEGECQGRRGVFPDNFVLP 123 human
AAI09445     177 CCQVMFDYAAVAEDELNLKKGDVITVINKsteDDGWWEGEVNGRRGFFPDNFVML 231 zebrafish
EGD76341     244 YCKVLFEYEPQQDDELAMTPGDVIRVVKKn-eDEGWWQGELNGKTGWFPDNFVEM 297 Salpingoeca sp. ATCC50818
NP_001108312 223 YCRVMFNYIPFLPDELALKKGDVILLISKetgDEGWWQGEHNGKTGLFPDNFVIP 277 African clawed frog
CAG03500     105 KCEVTFAYNPVNHDELQLNVGEIIEIIREeteDEGWWEGELNGRRGFFPDNFVMV 159 spotted green pufferfish

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