2ANU


Conserved Protein Domain Family
PHP_HisPPase_Thermotoga_like

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cd12111: PHP_HisPPase_Thermotoga_like 
Click on image for an interactive view with Cn3D
Polymerase and Histidinol Phosphatase domain of Thermotoga like
The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. Thermotoga PHP is an uncharacterized protein. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to give histidinol. The HisPPase can be classified into two types: the bifunctional HisPPase found in proteobacteria that belongs to the DDDD superfamily and the monofunctional Bacillus subtilis type that is a member of the PHP family. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.
Statistics
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PSSM-Id: 213995
Aligned: 6 rows
Threshold Bit Score: 372.14
Created: 16-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitedimer interface
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:The active site of PHP is characterized by a trinuclear metal cluster liganded by histidines, aspartate and glutamate.
  • Structure:2ANU; Thermotoga maritima HisPPase PHP domain binds 4Zn2+ and 2Cl- ions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #    #                        #                                         
2ANU_A        19 WLLCDFHVHTNXSDGHLPLGEVVDLFGKHGVDVVSITDHIVDRRTLEQRKRNGEPLgaitedkFQDYLKRLWREQKRAWE 98  Thermotoga mari...
YP_001940284 399 PLLCDFHIHSTYSDGRLTISEIVDFYGQRGFDCICLTDHLVDRKRLIGKFCELTGLvlt-ptkVAEYFETIEKEKKRAWK 477 Methylokorus in...
YP_001130522   3 WLYCDFHIHTTWSDGALSISEIVELFGSTGFDVIAITDHVLDSGSLQDGRSHSAVPed----qFSQYLQELWSAARHAWE 78  Prosthecochlori...
2983671        4 WLLCDFHIHTEMSDGSLSLRDVVDLYGSHGFDVIAITDHVFDPTYLSKLRERGTKVpsvteenFKDYMKVLKEEQKRAWN 83  Aquifex aeolicu...
YP_002249575   1 MLLCDFHIHTKYSDGSLELRKVVDLFGQAGFDVIAITDHVVNGDSMIGKFAYRFRFtit-eknFNEYMENVRYESERAWN 79  Thermodesulfovi...
YP_001997303   5 WLLCDFHIHTAFSDGALSLEDTIELYAENGFDVICITDHVLNEAELWDSWPQDQHPgvllkayYEDYIAALKVAAKKAWE 84  Chloroherpeton ...
Feature 1                  #            #                                                        
2ANU_A        99 EYGXILIPGVEITNNTDL----YHIVAVDVKEYVDPSLPVEEIVEKLKEQNALVIAAHPdrkkqdeehLSWYLWANXERF 174 Thermotoga mari...
YP_001940284 478 KYGMILFCGIEFNKDGYSpktsAHLLGIDLKNPIDPCLSLKEIIAEIHKQKALAVASHPhvfqsvwgpNTLFLWENQQEY 557 Methylokorus in...
YP_001130522  79 RWNMLVIPGVELTNNTSK----YHILALDVKEYINPDLGVEEIIEAIRFQGGVSVACHPyirnhsgeaPSEYLWTHHERL 154 Prosthecochlori...
2983671       84 EYRMLLIPGFEVTNNTDL----YHIVVLDVYEYIDPSLSVEEILKIVRENDGISIAAHPekkntdrehLSKHLYENMDYY 159 Aquifex aeolicu...
YP_002249575  80 KYEMLVIPGVEISKNYLSsdksSHILIIDIKDFIPACESYEAIFLEAKKQNAVVVACHPhhik-geirNTLYLWNNRNKY 158 Thermodesulfovi...
YP_001997303  85 KHELIVIPGIELTNNTQG----FHLLGVGVESYMNPGLPIEVLAAEIHKQGGIAVAAHPlrgylegtnELMYLWNHREQF 160 Chloroherpeton ...
Feature 1                                      # #                                      
2ANU_A       175 KDTFDAWEIANRDDLFNSVGVKKYRYVANSDFHElwHVYSWKTLVKSEKNIEAIKEAIRKNTDVAIYLXRK 245 Thermotoga maritima MSB8
YP_001940284 558 IPLLDAWEVANRNDLFSPVGLKKLPFIANSDFHKpkHIYSWKTILYCGKDPEEIKECIRSNRNVAITLYRD 628 Methylokorus infernorum V4
YP_001130522 155 ASLFDAWEVANRDDLFNVVGLKKFNYIANSDFHEekHLRSWKTLLRCRANIEAVKQAIRSNEAVSLFLYRG 225 Prosthecochloris vibriof...
2983671      160 KELFDAWEIANQYDLQNTVGLKGCRFVANSDFHHikHFFAWRTLLKTEKDPEAIKEAIKKNEEVAILFFKP 230 Aquifex aeolicus VF5
YP_002249575 159 GKYIDAWEIANRDDVFNVVSLKKYPYIANSDFHKarHLYSWKTLLNCEKNVVSVKKCIKHNKGVAITLFRG 229 Thermodesulfovibrio yell...
YP_001997303 161 KHMIDAWEIGNRNELYHLVGSENLNYVASSDFHDpqHLYSWKTLLKSAKEIDAIKAAVRKNHSVAICLFRG 231 Chloroherpeton thalassiu...

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