2DNU


Conserved Protein Domain Family
SH3_Tks5_2

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cd12077: SH3_Tks5_2 
Click on image for an interactive view with Cn3D
Second Src homology 3 domain of Tyrosine kinase substrate with five SH3 domains
Tks5, also called SH3 and PX domain-containing protein 2A (SH3PXD2A) or Five SH (FISH), is a scaffolding protein and Src substrate that is localized in podosomes, which are electron-dense structures found in Src-transformed fibroblasts, osteoclasts, macrophages, and some invasive cancer cells. It binds and regulates some members of the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. It is required for podosome formation, degradation of the extracellular matrix, and cancer cell invasion. Tks5 contains an N-terminal Phox homology (PX) domain and five SH3 domains. This model characterizes the second SH3 domain of Tks5. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 213010
Aligned: 5 rows
Threshold Bit Score: 105.114
Created: 1-Feb-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of p47phox tandem SH3 domains to p22phox-derived peptides
  • Comment:SH3 domains bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               # #     ##                ###                  # # ##   
2DNU_A          9 EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYL--------GKEGWAPASYLKK 62   human
Q1LYG0        252 EKYVSVQAYASQGKDEIGFEKGVTVEVIQKNLEGWWYIRYQ--------GKEGWAPASYLKK 305  zebrafish
Q5TCZ1        269 EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYL--------GKEGWAPASYLKK 322  human
XP_002936850  235 EKYITVQPYTSQGKDEIGFEKGDTVEVIQKNLEGWWFIKGSfvifcryqGKEGWAPASYLKK 296  western clawed frog
XP_421741     240 EKYVTIQPYASQGKDEIGFEKGVTVEVIQKNLEGWWYIRYL--------GKEGWAPASYLKK 293  chicken

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