Conserved Protein Domain Family
SH3_GRAF3

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cd12066: SH3_GRAF3 
Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
GRAF3 is also called Rho GTPase activating protein 42 (ARHGAP42) or ARHGAP10-like. Though its function has not been characterized, it may be a GAP with activity towards RhoA and Cdc42, based on its similarity to GRAF and GRAF2. It contains an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, a Rho GAP domain, and a C-terminal SH3 domain. The SH3 domain of GRAF and GRAF2 binds PKNbeta, a target of the small GTPase Rho. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Statistics
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PSSM-Id: 212999
Aligned: 5 rows
Threshold Bit Score: 132.878
Created: 21-Nov-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  #   #                  ##            # ##    
NP_082099    787 QAQAMYSCKAEHSHELSFPQGAIFSNVHPSVEPGWLKATYEGRTGLVPENYVVFL 841 house mouse
EAW66995     352 QAKAMYSCKAEHSHELSFPQGAIFSNVYPSVEPGWLKATYEGKTGLVPENYVVFL 406 human
XP_002935619 820 QAKAMYSCKAEHSHELSFPQGALFTNVYRSVEPGWLKATYEGKTGLIPENYVVYL 874 western clawed frog
NP_001189372 803 DAKALYSCQAEHSHELSFPQGAHFSNVYPSVEPGWLQATFDGKTGLIPENYVEYL 857 zebrafish
XP_417185    820 QAKAMYSCKAEHSHELSFPQGAIFSNVYPSVEPGWLKATYEGKTGLVPENYVVFL 874 chicken

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