2O2O


Conserved Protein Domain Family
SH3_CIN85_2

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cd12055: SH3_CIN85_2 
Click on image for an interactive view with Cn3D
Second Src Homology 3 domain (SH3B) of Cbl-interacting protein of 85 kDa
CIN85, also called SH3 domain-containing kinase-binding protein 1 (SH3KBP1) or CD2-binding protein 3 (CD2BP3) or Ruk, is an adaptor protein that is involved in the downregulation of receptor tyrosine kinases by facilitating endocytosis through interaction with endophilin-associated ubiquitin ligase Cbl proteins. It is also important in many other cellular processes including vesicle-mediated transport, cytoskeletal remodelling, apoptosis, cell adhesion and migration, and viral infection, among others. CIN85 exists as multiple variants from alternative splicing; the main variant contains three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. This alignment model represents the second SH3 domain (SH3B) of CIN85. SH3B has been shown to bind Cbl proline-rich peptides and ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212988
Aligned: 4 rows
Threshold Bit Score: 116.634
Created: 3-Jun-2011
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putativeputative
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:putative peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of the first SH3 (SH3A) domains of human CMS and CIN85 to Cbl-b peptide
  • Comment:SH3 domains bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  #   #                ###          # # ##   
2O2O_A        20 RCQVAFSYLPQNDDELELKVGDIIEVVGEVEEGWWEGVLNGKTGMFPSNFIKE 72  human
NP_001025976 182 RCQVAFSYLPQNEDELELKVGDIIEVVGEVEEGWWEGILNGKTGMFPSNFIKE 234 chicken
AAI66366       7 RCQVAFSYLPQNEDELELKVGEIIEVLGEVEEGWWEGVLNGKTGMFPSNFIRE 59  western clawed frog
CBN82173     114 RCKAAFSYVPQHEDELGLKIGDVIEIIAEVEEGWWEGYLNGKTGMFPSNFTKE 166 European seabass

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