2DNU


Conserved Protein Domain Family
SH3_Tks_2

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cd12016: SH3_Tks_2 
Click on image for an interactive view with Cn3D
Second Src homology 3 domain of Tyrosine kinase substrate (Tks) proteins
Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Vertebrates contain two Tks proteins, Tks4 (Tyr kinase substrate with four SH3 domains) and Tks5 (Tyr kinase substrate with five SH3 domains), which display partially overlapping but non-redundant functions. Both associate with the ADAMs family of transmembrane metalloproteases, which function as sheddases and mediators of cell and matrix interactions. Tks5 interacts with N-WASP and Nck, while Tks4 is essential for the localization of MT1-MMP (membrane-type 1 matrix metalloproteinase) to invadopodia. Tks proteins contain an N-terminal Phox homology (PX) domain and four or five SH3 domains. This model characterizes the second SH3 domain of Tks proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212949
Aligned: 7 rows
Threshold Bit Score: 96.3718
Created: 1-Jun-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of p47phox tandem SH3 domains to p22phox-derived peptides
  • Comment:SH3 domains bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               # #     ##                ###          # # ##   
2DNU_A          9 EKYVTVQPYTSQSkDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYLKK 62   human
XP_002740010  744 ESYVTIQKYKAENdDEISLDNGVVVLVLKKNLDGWWFVRHEGREGWAPATYLKK 797  Saccoglossus kowalevskii
XP_002603793  185 EQYVTTNAYNARGgDEVGFDRGVNVEVLEKNLEGWWYIRYQDVEGWAPSTYLEK 238  Florida lancelet
XP_783086     227 ESYITNNAYQGQAeDEISFETGVVVTVIQKSLDGWWKVSYQGKQGWAPATFLQI 280  purple urchin
EGD82361      231 EKYISTQAFRAENeDEIGYDKGAVVTVLEKKLDGWWKVSYQGNVGWTPGSYLRR 284  Salpingoeca sp. ATCC50818
A1X283        224 EKYTVIYPYTARDqDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYLKK 277  human
XP_001624740  224 GQYITTTSHKAELdDEITFETGVIVSVIQKNFDGWWLIRYQDKEGWAPAMYLRK 277  starlet sea anemone

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