Conserved Protein Domain Family
SH3_PACSIN_like

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cd11999: SH3_PACSIN_like 
Src homology 3 domain of an unknown subfamily of proteins with similarity to Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins
PACSINs, also called Synaptic dynamin-associated proteins (Syndapins), act as regulators of cytoskeletal and membrane dynamics. They bind both dynamin and Wiskott-Aldrich syndrome protein (WASP), and may provide direct links between the actin cytoskeletal machinery through WASP and dynamin-dependent endocytosis. Vetebrates harbor three isoforms with distinct expression patterns and specific functions. PACSINs contain an N-terminal F-BAR domain and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212932
Aligned: 3 rows
Threshold Bit Score: 121.584
Created: 6-Jan-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               # #  #   #                  ##             # ##  
NP_001091172 345 GVRVRAVYDYSGQESDELSFKAGDDLTKIEDEDEQGWCKGVTDKGQVGLYPANYVE 400 African clawed frog
NP_001003498 331 GVRVRALYNYTGEEPDELSFKSGEEFLKVEDEDDQGWCWGVKEGGAEGFYPANYVL 386 zebrafish
XP_003225284 347 GQRVRAVYDYVGQEADELSFKAGELLSKLEDEDEQGWCKGVTDSGRVGLYPANYVE 402 green anole

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