Conserved Protein Domain Family
SH3_Abp1_fungi_C1

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cd11962: SH3_Abp1_fungi_C1 
First C-terminal Src homology 3 domain of Fungal Actin-binding protein 1
Abp1 is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a central proline-rich region, and a C-terminal SH3 domain (many yeast Abp1 proteins contain two C-terminal SH3 domains). Yeast Abp1 also contains two acidic domains that bind directly to the Arp2/3 complex, which is required to initiate actin polymerization. The SH3 domain of yeast Abp1 binds and localizes the kinases, Ark1p and Prk1p, which facilitate actin patch disassembly following vesicle internalization. It also mediates the localization to the actin patch of the synaptojanin-like protein, Sjl2p, which plays a key role in endocytosis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212895
Aligned: 6 rows
Threshold Bit Score: 81.7656
Created: 22-Dec-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of the SH3 domains of human cortactin and yeast Abp1 to peptide ligands
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  #   ##                 ##           # # ##   
7363175      729 PAIVIYDYSPEEE-NEIELVENEQIQILEFVDDGWWLGENSKGQQGLFPSNYVEI 782  fission yeast
XP_500868    700 SATVEYDYTKDEE-GEIDLVEDEIVTDIEFLDENWWSGTNSKGESGLFPSNYVRL 753  Yarrowia lipolytica CLIB122
XP_001908944 636 RAVVLFDYEKAED-NELELRENEIISNIDKVDPDWWMGTDAQGRSGLFPCNYVEI 689  Podospora anserina DSM 980
EEH21591     680 RALVVYDYEKTED-NEIDLREGEYVMEIDMVSDDWWMGINARGERGLFPQNYVEV 733  Paracoccidioides brasiliensis Pb03
EGX90209     774 RAVILYDYDKDED-NEINLVEGEIVADVDQVDPDWWIGTNKHGENGLFPSSYVEL 827  Cordyceps militaris CM01
EGY22963     669 AAQTPAGAQAGGQrAIIHSAEGQYVTNIEMVDEDWWMGTNSKGESGLFPSNYVEL 723  Verticillium dahliae VdLs.17

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