Conserved Protein Domain Family
SH3_Nck1_3

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cd11904: SH3_Nck1_3 
Third Src Homology 3 domain of Nck1 adaptor protein
Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212837
Aligned: 3 rows
Threshold Bit Score: 133.615
Created: 1-Dec-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif.
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                   ##             # ##   
127962       193 HVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKInGMVGLVPKNYVTV 249 human
NP_001090291 193 HVVQALYPFSSSNEEELNFEKGEVMDVIEKPENDPEWWKCRKSnGLVGLVPKNYVTI 249 African clawed frog
CBN82003     204 HTVQALYPFGSGNDEELNFEKGEVMEVVEKPENDPEWWKCRKAdGQLGLVPKNYVTV 260 European seabass

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