2FRY,1U5S


Conserved Protein Domain Family
SH3_Nck2_3

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cd11903: SH3_Nck2_3 
Click on image for an interactive view with Cn3D
Third Src Homology 3 domain of Nck2 adaptor protein
Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212836
Aligned: 5 rows
Threshold Bit Score: 125.94
Created: 1-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Lim4 domainpeptide ligand
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:Lim4 domain interface [polypeptide binding site]
Evidence:
  • Structure:1U5S; Interface between the third SH3 domain of human Nck2 and the Lim4 domain of Pinch-1; contacts at 4A.
  • Comment:Nck2 and Pinch-1 association is transient; it plays a role in regulating focal adhesion turnover during integrin signaling.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                             #             ## ###  
2FRY_A         3 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 61  human
1U5S_A         7 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLS 65  human
NP_957291    217 HVVQTLYPFSSVTEEELNFEKGETMEVLEKPENDPEWWRCKNSRGIVGLVPKNYVVVLD 275 zebrafish
NP_001025985 198 HVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNSRGQIGLVPKNYVVIIS 256 chicken
NP_001083313 199 HIVKTLYPFSSVTEEELNFEKGETMEVIEKPDNDPEWWKCKNSSGQIGLVPKNYVVILS 257 African clawed frog

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