2J6F,2BZ8


Conserved Protein Domain Family
SH3_CD2AP-like_1

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cd11873: SH3_CD2AP-like_1 
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First Src Homology 3 domain (SH3A) of CD2-associated protein and similar proteins
This subfamily is composed of the first SH3 domain (SH3A) of CD2AP, CIN85 (Cbl-interacting protein of 85 kDa), and similar domains. CD2AP and CIN85 are adaptor proteins that bind to protein partners and assemble complexes that have been implicated in T cell activation, kidney function, and apoptosis of neuronal cells. They also associate with endocytic proteins, actin cytoskeleton components, and other adaptor proteins involved in receptor tyrosine kinase (RTK) signaling. CD2AP and the main isoform of CIN85 contain three SH3 domains, a proline-rich region, and a C-terminal coiled-coil domain. All of these domains enable CD2AP and CIN85 to bind various protein partners and assemble complexes that have been implicated in many different functions. SH3A of both proteins bind to an atypical PXXXPR motif at the C-terminus of Cbl and the cytoplasmic domain of the cell adhesion protein CD2. CIN85 SH3A binds to internal proline-rich motifs within the proline-rich region; this intramolecular interaction serves as a regulatory mechanism to keep CIN85 in a closed conformation, preventing the recruitment of other proteins. CIN85 SH3A has also been shown to bind ubiquitin. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212806
Aligned: 15 rows
Threshold Bit Score: 88.8629
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Structure:2J6F: Human CMS first SH3 domain binds Cbl-B peptide; contacts at 4A.
  • Structure:2BZ8: Human CIN85 SH3A binds Cbl-b peptide; contacts at 4A.
  • Comment:SH3 domains bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  ## ##                 ####              # # ##   
2J6F_A         3 DYIVEYDYDAVHdDELTIRVGEIIRNVKKl-qEEGWLEGELNg----RRGMFPDNFVKE 56  human
2BZ8_A         3 EAIVEFDYQAQHdDELTISVGEIITNIRKe--DGGWWEGQINg----RRGLFPDNFVRE 55  human
XP_002119629   5 KGIVQFDYEAEApDELTLRVGDVIINIKNv--EEGWCQGTLAg----KVGMFPDNFVKI 57  Ciona intestinalis
CBY30464       3 TFKVDFPYKATEsDELSLEVGDLIRNCVQk--EDGWLEGDLNg----RTGMFPDNFATK 55  Oikopleura dioica
EGD76341       3 TFKAIFDYDAEAeDELTLRVGDIITDAQAdpeAEGWCKGKLNg----RVGVFPDNFVEK 57  Salpingoeca sp. ATCC50818
EEZ98551      10 EVLVEHDYIAKEpNELTITRGDIIKDVTKk--QGGWWEGTLKd----KKGLFPDNFVKV 62  red flour beetle
CCD60532       2 EVIVEYDYTAEEnDELTIKKGDIIRDVSQf--EEGWYIGCLNg----RIGVFPDNFVKT 54  Schistosoma mansoni
XP_003387364   2 EGVVLFDYSTEQdDELSLNVGDIVTDVTVi--EEGWCEGTLNg----IRGVFPDNFVKL 54  Amphimedon queenslandica
AAI09445       2 EVLVLLGFEATMpDELTVHVGDIVKNVSKa-kEEGWLEGDLRg----KRGMFPGNFVKE 55  zebrafish
EFX66047       2 EVLVLFDYDGQAeDELTIRKGDVIVDVKKl--DGGWWHGKLKtlkgsIQGLFPDNFVMV 58  common water flea

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