2KGT


Conserved Protein Domain Family
SH3_Brk

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cd11847: SH3_Brk 
Click on image for an interactive view with Cn3D
Src homology 3 domain of Brk (Breast tumor kinase) Protein Tyrosine Kinase (PTK), also called PTK6
Brk is a cytoplasmic (or non-receptor) PTK with limited homology to Src kinases. It has been found to be overexpressed in a majority of breast tumors. It plays roles in normal cell differentiation, proliferation, survival, migration, and cell cycle progression. Brk substrates include RNA-binding proteins (SLM-1/2, Sam68), transcription factors (STAT3/5), and signaling molecules (Akt, paxillin, IRS-4). Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation site. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212781
Aligned: 4 rows
Threshold Bit Score: 102.251
Created: 30-Nov-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Src-family tyrosine kinase SH3 domains bound to peptide/protein ligands
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 1280858
  • Citation:PMID 9351809
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  #   #               ###                # # ##   
2KGT_A        12 KYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEaGGAVAQGYVPHNYLAE 69  human
NP_001070140  70 IYMALWDFKARNDQELSFKAGDKFEITDRSGDWWTANKKDI-FGRVTTGFVPYNYLAR 126 zebrafish
XP_003446081  75 IYTAMWPFESRHQEELSFQEGDLFRVVSRSGDWWTARKIDRnGHVVAQGIVPNNYLAR 132 Nile tilapia
XP_682778     57 LYKALWSYKARGADELSFQEGEQFRICERQGEWWTALKLGRdGAVTGRGFVPNHFLAR 114 zebrafish

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