Conserved Protein Domain Family
SH3_Srms

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cd11846: SH3_Srms 
Src homology 3 domain of Srms Protein Tyrosine Kinase
Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (Srms) is a cytoplasmic (or non-receptor) PTK with limited homology to Src kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Srms lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212780
Aligned: 4 rows
Threshold Bit Score: 103.703
Created: 28-Nov-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the structures of other Src-family tyrosine kinase SH3 domains bound to peptide/protein ligands
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 1280858
  • Citation:PMID 9351809
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             # #  ##  #               ###             # # ##   
Q9H3Y6        55 LFLALYDFTARCGGELSVRRGDRLCALEEGGGYIFARRLSGQPSAGLVPITHVAK 109 human
XP_417420     55 LFIALYAFTARSADELSVNAGDKLRVLREEGDYVLARRLLGEPATGYVPAAYVAN 109 chicken
AAI62876      52 LYAALFDFVARSEEELSVKEGDKLSVIEKRGDYVFAKKLTGSLESGLIPANYVAL 106 zebrafish
XP_002942432  46 RVTALYSFNARSTHELTIEQGEELCMISDEGEYILARKLTGNMESGLVPASYVAQ 100 western clawed frog

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