1UFF


Conserved Protein Domain Family
SH3_Intersectin_1

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cd11836: SH3_Intersectin_1 
Click on image for an interactive view with Cn3D
First Src homology 3 domain (or SH3A) of Intersectin
Intersectins (ITSNs) are adaptor proteins that function in exo- and endocytosis, actin cytoskeletal reorganization, and signal transduction. They are essential for initiating clathrin-coated pit formation. They bind to many proteins through their multidomain structure and facilitate the assembly of multimeric complexes. Vertebrates contain two ITSN proteins, ITSN1 and ITSN2, which exist in alternatively spliced short and long isoforms. The short isoforms contain two Eps15 homology domains (EH1 and EH2), a coiled-coil region and five SH3 domains (SH3A-E), while the long isoforms, in addition, contain RhoGEF (also called Dbl-homologous or DH), Pleckstrin homology (PH) and C2 domains. ITSN1 and ITSN2 are both widely expressed, with variations depending on tissue type and stage of development. The first SH3 domain (or SH3A) of ITSN1 has been shown to bind many proteins including Sos1, dynamin1/2, CIN85, c-Cbl, PI3K-C2, SHIP2, N-WASP, and CdGAP, among others. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212770
Aligned: 9 rows
Threshold Bit Score: 98.5842
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                        ##            # ##   
1UFF_A          7 GYRALYPFEARNhDEMSFNSGDIIQVDEKtv-----gEPGWLYGSFQGNFGWFPCNYVEK 61   human
Q15811        744 YYRALYPFESRShDEITIQPGDIVMVKGEwvdesqtgEPGWLGGELKGKTGWFPANYAEK 803  human
XP_002168590  573 PYKLMYSFENRNpDELNLKEGDIVQVDENdk----tvPTGWLRGTFKGAEGLFPANYASK 628  green hydra
XP_001621845   15 YYRVLYAFEPRNpDEIEVNEDDIVTVDHDnc----taPPGWLRGKCHGKTGLFPANYAEK 70   starlet sea anemone
7298751       678 KYQAVYEFNARNaEEITFVPGDIILVPLEqn-----aEPGWLAGEINGHTGWFPESYVEK 732  fruit fly
NP_503037     665 KCRALFAFEARSeDELSFEPGDVIIVFQSha-----aEPGWRAGQLREKVGWFPEAFVEA 719  nematode
EFX81424      821 RYRALYEFVARNgDEISFQPGDIIMVTESls-----nEPGWLSGEVRGHVGWFPEAYVEK 875  common water flea
XP_002123219  761 KYKALYSFTARNpDELSIQAGETITVDESqd-----vEPDWLAGTKGGKAGWFPANYVEK 815  Ciona intestinalis
XP_002590626  450 RYQAIYNFEARNdDEMSLQRGDIVLIPEVqe----daEPGWLGGECKGRTGWFPANYVER 505  Florida lancelet

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