Conserved Protein Domain Family
SH3_Shank

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cd11832: SH3_Shank 
Src homology 3 domain of SH3 and multiple ankyrin repeat domains (Shank) proteins
Shank proteins carry scaffolding functions through multiple sites of protein-protein interaction in its domain architecture, including ankyrin (ANK) repeats, a long proline rich region, as well as SH3, PDZ, and SAM domains. They bind a variety of membrane and cytosolic proteins, and exist in alternatively spliced isoforms. They are highly enriched in postsynaptic density (PSD) where they interact with the cytoskeleton and with postsynaptic membrane receptors including NMDA and glutamate receptors. They are crucial in the construction and organization of the PSD and dendritic spines of excitatory synapses. There are three members of this family (Shank1, Shank2, Shank3) which show distinct and cell-type specific patterns of expression. Shank1 is brain-specific; Shank2 is found in neurons, glia, endocrine cells, liver, and kidney; Shank3 is widely expressed. The SH3 domain of Shank binds GRIP, a scaffold protein that binds AMPA receptors and Eph receptors/ligands. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212766
Aligned: 7 rows
Threshold Bit Score: 104.44
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                 ##            # ##
Q9Y566        558 SFMAVKSYQAQAegEISLSKGEKIKVLSIGEGGFWEGQVKgRVGWFPSDC 607  human
XP_001634679  464 RFIAVKEYKPNMggELALNKGDIVEVLYVGEKGFWEGRVDgRNGWFPHTC 513  starlet sea anemone
XP_002607814  491 QFVAVKKYVPREvgELALAKGDKVTVLGIGEQGFWEGRVGsNEGWFPSDC 540  Florida lancelet
XP_001203175  643 YYIAKQNYSAQEvgELSLHKGDHVEVTAIGEYNYWQGSVAhSMGWFPSYC 692  purple urchin
Q9UPX8        151 LFVAVKPYQPQVdgEIPLHRGDRVKVLSIGEGGFWEGSARgHIGWFPAEC 200  human
CAG07204      499 VFVATRSHSAQGerEISFNKGDRVKVLSVGEGGYWEGTVRgRTGWFPSDC 548  spotted green pufferfish
Q9BYB0        476 KFIAVKAHSPQGegEIPLHRGEAVKVLSIGEGGFWEGTVKgRTGWFPADC 525  human

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