1GCP


Conserved Protein Domain Family
SH3_VAV_1

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cd11831: SH3_VAV_1 
Click on image for an interactive view with Cn3D
First Src homology 3 domain of VAV proteins
VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212765
Aligned: 3 rows
Threshold Bit Score: 97.2921
Created: 27-Oct-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          # #  #         #                  ##              # ##   
1GCP_A      6 KMEVFQEYYGIPpppgafgpFLRLNPGDIVELTKAeaeHNWWEGRNTatnEVGWFPCNRVHP 67  house mouse
P52735    590 KMVAMQNYHGNPapp--gkpVLTFQTGDVLELLRGdpeSPWWEGRLVqtrKSGYFPSSSVKP 649 human
4416406   502 KMQVIRNYSGTPppalhegpPLQLQAGDTVELLKGdahSLFWQGRNLasgEVGFFPSDAVKP 563 human

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