2RQT


Conserved Protein Domain Family
SH3_ASAP

?
cd11821: SH3_ASAP 
Click on image for an interactive view with Cn3D
Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins
ASAPs are Arf GTPase activating proteins (GAPs) and they function in regulating cell growth, migration, and invasion. They contain an N-terminal BAR domain, followed by a Pleckstrin homology (PH) domain, an Arf GAP domain, ankyrin (ANK) repeats, and a C-terminal SH3 domain. Vertebrates contain at least three members, ASAP1, ASAP2, and ASAP3, but some ASAP3 proteins do not seem to harbor a C-terminal SH3 domain. ASAP1 and ASAP2 show GTPase activating protein (GAP) activity towards Arf1 and Arf5. They do not show GAP activity towards Arf6, but are able to mediate Arf6 signaling by binding stably to GTP-Arf6. ASAP3 is an Arf6-specific GAP. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
?
PSSM-Id: 212755
Aligned: 14 rows
Threshold Bit Score: 103.163
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                   ##               # ##
2RQT_A          3 RVKTIYDCQADnddELTFIEGEVIIVTGEe--dQEWWIGHIEGqpeRKGVFPVSF 55   human
O43150        948 RVKALYNCVADnpdELTFSEGDVIIVDGEe--dQEWWIGHIDGdpgRKGAFPVSF 1000 human
XP_002168456  424 RAKALYDCDADhddELSFVEGEVIIMIKEa--dPDWWYGEVEGephRNGVFPMSF 476  green hydra
NP_001163085 1067 RCRALYDCVADnddELEFKEGEILIVLNErtddENWMEGIIEGqptRKGMFPVSF 1121 fruit fly
NP_001041455  929 RVRAIYDCEADnqdELTFVENEIIVVTGVe--dQDWWVGHVEHqphRVGVFPVSF 981  Ciona intestinalis
XP_002401076  243 RCRALYDCCADqrdELSFAEGEIIVIISEitedDQWMEGMIEGephRRGVFPTSF 297  black-legged tick
XP_003447762  916 RVQALYDCQADhhdELSFSEGQVLVVLGQe--dNDWWHGYIEEepdQRGLFPSSF 968  Nile tilapia
XP_001626278  941 RVQALYDCEADnddELSFMEGDVILVKGEge-dAEWWLGELERkpgNSGVFPISF 994  starlet sea anemone
XP_002191384  896 RVKAVADCKGDkarELTFSKGEVIVVTREe--dEQIWVGFIEGdgsRTGVFPASF 948  zebra finch
XP_003453292  846 RVKALVDCRAVsseQLAFFKDEIIVVTATn--dPHWWTGHIEGdpsRSGTFPVNY 898  Nile tilapia

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap