1UJ0,2L0A


Conserved Protein Domain Family
SH3_STAM

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cd11820: SH3_STAM 
Click on image for an interactive view with Cn3D
Src homology 3 domain of Signal Transducing Adaptor Molecules
STAMs were discovered as proteins that are highly phosphorylated following cytokine and growth factor stimulation. They function in cytokine signaling and surface receptor degradation, as well as regulate Golgi morphology. They associate with many proteins including Jak2 and Jak3 tyrosine kinases, Hrs, AMSH, and UBPY. STAM adaptor proteins contain VHS (Vps27, Hrs, STAM homology), ubiquitin interacting (UIM), and SH3 domains. There are two vertebrate STAMs, STAM1 and STAM2, which may be functionally redundant; vertebrate STAMs contain ITAM motifs. They are part of the endosomal sorting complex required for transport (ESCRT-0). STAM2 deficiency in mice did not cause any obvious abnormality, while STAM1 deficiency resulted in growth retardation. Loss of both STAM1 and STAM2 in mice proved lethal, indicating that STAMs are important for embryonic development. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212754
Aligned: 10 rows
Threshold Bit Score: 111.403
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Comment:The SH3 domain of STAM2 binds to UBPY at a RXXKP motif.
  • Structure:1UJ0; Mus musculus STAM2 SH3 domain binds UBPY peptide; contacts at 4A.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  ## ##                 ##            # ##   
1UJ0_A         6 RRVRALYDFEAVEdNELTFKHGELITVLDDsDANWWQGENHrGTGLFPSNFVTT 59  house mouse
2L0A_A        18 RKVRAIYDFEAAEdNELTFKAGEIITVLDDsDPNWWKGETHqGIGLFPSNFVTA 71  human
CBY20848     212 IKVKALYDFEAVEdNELTFRADDIIILIEEcDPNWWEGSLNgKSGLFPANFVTK 265 Oikopleura dioica
NP_477448    235 RKVRALYDFEAAEeNELTFFAGEIIHVLDDsDPNWWKGYNQrGEGLFPSNFVTA 288 fruit fly
XP_002403780 213 RKVRALYDFEAAEdNELTFKAGELLLVLDDsDPNWWKGSNHrGEGLFPANFAQI 266 black-legged tick
XP_789926    215 RKVKALYDFEAAEdNELTFKAGEIISVLDDrDVNWWKGENFrGTGLFPSNFVTA 268 purple urchin
CAX69372     231 GQVRALYDFEAAEdNELSFRAGELILLLDDsDENWWLGSNSqGQGLFPAQFVKR 284 Schistosoma japonicum
EFX78711     210 RKVRALYDFEAAEdNELTFKAGEIIHVIDDsDPNWWKGSNQrGEGLFPANFVST 263 common water flea
ADY40677     219 RDVRALYDFEAAEdNELTFSSGDVITVTDDsDPNWWRGKSSrGEGLFPASFVTS 272 pig roundworm
CAP19571     206 RKVRALYDFEAAEdNELTFKAGELVIILDDsDPNWWKGENHrGVGLFPSNFVTT 259 zebrafish

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