Conserved Protein Domain Family
SH3_AHI-1

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cd11812: SH3_AHI-1 
Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
AHI-1, also called Jouberin, is expressed in high levels in the brain, gonad tissues, and skeletal muscle. It is an adaptor protein that interacts with the small GTPase Rab8a and regulates it distribution and function, affecting cilium formation and vesicle transport. Mutations in the AHI-1 gene can cause Joubert syndrome, a disorder characterized by brainstem malformations, cerebellar aplasia/hypoplasia, and retinal dystrophy. AHI-1 variation is also associated with susceptibility to schizophrenia and type 2 diabetes mellitus progression. AHI-1 contains WD40 and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212746
Aligned: 6 rows
Threshold Bit Score: 106.826
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
peptide ligand
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                 ##              # ## 
Q8N157       1055 TVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIG-KGQEGYFPANHV 1106 human
XP_002741668  919 RVVSLYDYNQARSDELNLLRGDVITVLHQDNENWWLGELVkNGQQGYFPANYV 971  Saccoglossus kowalevskii
XP_002124017 1119 TVVALYDYQANRSDEITIVRGDIIRVLYKDGPTWWFGELVsDGRQGYFPSNYV 1171 Ciona intestinalis
XP_002189154 1093 TVVALYDYTAHRSDELTIHRSDIIQVLYKDNDNWWFGSLA-NGQQGYFPANYV 1144 zebra finch
XP_002935854 1004 TVVALYDYTAHRSDELTIHRSDIIHVLYKDNDNWWFGSLA-NGQQGYFPANYV 1055 western clawed frog
NP_001071029  770 TVVSLYEYRANRSDELSMRRGDVVHVLYKDNDSWWFGRLV-SGQEGYFPASYV 821  zebrafish

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