1AZE,2A37,2A36,4GBQ


Conserved Protein Domain Family
SH3_GRB2_like_N

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cd11804: SH3_GRB2_like_N 
Click on image for an interactive view with Cn3D
N-terminal Src homology 3 domain of Growth factor receptor-bound protein 2 (GRB2) and related proteins
This family includes the adaptor protein GRB2 and related proteins including Drosophila melanogaster Downstream of receptor kinase (DRK), Caenorhabditis elegans Sex muscle abnormal protein 5 (Sem-5), GRB2-related adaptor protein (GRAP), GRAP2, and similar proteins. Family members contain an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. GRB2/Sem-5/DRK is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. GRAP2 plays an important role in T cell receptor (TCR) signaling by promoting the formation of the SLP-76:LAT complex, which couples the TCR to the Ras pathway. GRAP acts as a negative regulator of T cell receptor (TCR)-induced lymphocyte proliferation by downregulating the signaling to the Ras/ERK pathway. The N-terminal SH3 domain of GRB2 binds to Sos and Sos-derived proline-rich peptides. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212738
Aligned: 16 rows
Threshold Bit Score: 93.5753
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Structure:1AZE; Human GRB2 N-terminal SH3 domain binds Sos peptide (vpppvpprrr ); contacts at 4A
  • Citation:PMID 7773779
  • Structure:4GBQ; Mus musculus GRB2 N-terminal SH3 domain binds 10-residue Sos peptide (vpppvpprrr); contacts at 4A
  • Citation:PMID 9135122
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            ####  ##  #                  ##            #### 
1AZE_A         2 EAIAKVDFKATAddELSFKRGDILKVLNEesdQNWYKAELNgKDGFIPKNYI 53  human
3913785        2 ESVALYSFQATEsdELAFNKGDTLKILNMeddQNWYKAELRgVEGFIPKNYI 53  human
P29355         2 EAVAEHDFQAGSpdELSFKRGNTLKVLNKdedPHWYKAELDgNEGFIPSNYI 53  nematode
EFW42880       2 ESVALHDFNATAvdELSFKAGSIVKIMKMd-dQSWYKAEQDgRVGFIPSNYI 52  Capsaspora owczarzaki ATCC 30864
ADD38444       2 EAVAKHDFSATAedELSFRKGQILKVLNIeddKNWYRAESGgKEGLIPSNYI 53  salmon louse
XP_003382848   2 EAVGMYDFQATSedELSFGKGQIVKILSTdedPNWYKAEKDgREGLIPKNYV 53  Amphimedon queenslandica
EGD83536       2 EARALHDFAATQkdELSFSKGSIVKVINIdedKNWFKAELDgKTGYIPANYV 53  Salpingoeca sp. ATCC50818
XP_001630139   2 EARAKHEFKATQedDLGFAKGSILNVLDMdqdKNWYKAEQDgREGWIPKTYI 53  starlet sea anemone
CAX70561       2 EAEASYDFVANAedELGFKKGSILKILCVeddPNWYLAEQEgRTGLIPCNYI 53  Schistosoma japonicum
XP_002125941   2 EAVAMYDFIATAddELGFVKGSILKVSCKgtdPNWCKAEQDgKEGLVPMNYI 53  Ciona intestinalis

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