1UHC


Conserved Protein Domain Family
SH3_DNMBP_C2_like

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cd11800: SH3_DNMBP_C2_like 
Click on image for an interactive view with Cn3D
Second C-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba, and similar domains
DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin, Rho GTPase signaling, and actin dynamics. It plays an important role in regulating cell junction configuration. The C-terminal SH3 domains of DNMBP bind to N-WASP and Ena/VASP proteins, which are key regulatory proteins of the actin cytoskeleton. Also included in this subfamily is the second C-terminal SH3 domain of Rho guanine nucleotide exchange factor 37 (ARHGEF37), whose function is still unknown. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212734
Aligned: 9 rows
Threshold Bit Score: 102.45
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #    #                     ##             # ##   
1UHC_A         15 VYFAVYTFKARnp-nELSVSANQKLKILEFKDvtGNTEWWLAEVN-GKKGYVPSNYIRK 71   human
A1IGU4        607 QVVAVYPFVARst-hELSLQAGQPVTILEAQDkkGNPEWSLVEAN-GQRGYVPSNFLAR 663  house mouse
EFN85007     1123 FYYAMYDFAANip-gTLSVTNGQALRLIRPHDekGNDEWWLVENReGKQGYVPRNYLQS 1180 Harpegnathos saltator
XP_781099    1733 YYYAEWGFTASsp-nELSLTEGGVVTVIAAQDteGNSEWWLVEKD-GEQGFVPSTYLAK 1789 purple urchin
XP_002609089 1545 QYYAEYGFSARae-tELTIHEGQVVTVLQPYDlqGNPEWWLVQHE-EGQGYVPSNYLNR 1601 Florida lancelet
XP_001637043 1635 VYFAQFDFEGTse-aEVSIDAGQLVTVLQKHDleGNPEWWLVEAE-GKRGYVAADFLAS 1691 starlet sea anemone
XP_001637043 1544 PYIALCTFEGQna-gEISVNEGDLVTVQRRCDtsGNTEWWLVSYH-GRKGYIPGDFLDP 1600 starlet sea anemone
XP_002405958 1360 YHYALYPFSACgp-hQLSIAQGQVLLVVHQCDlhGNPEWWFVQDRhGNQGYVPGNYLHK 1417 black-legged tick
XP_003427108 1109 FVYALYEFNHPelagTLSVKEGQALKVLEKHDqkNNPDWWLVEDRtGGKGYVPENYLGK 1167 jewel wasp

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