1UG1


Conserved Protein Domain Family
SH3_DNMBP_C1

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cd11798: SH3_DNMBP_C1 
Click on image for an interactive view with Cn3D
First C-terminal Src homology 3 domain of Dynamin Binding Protein, also called Tuba
DNMBP or Tuba is a cdc42-specific guanine nucleotide exchange factor (GEF) that contains four N-terminal SH3 domains, a central RhoGEF [or Dbl homology (DH)] domain followed by a Bin/Amphiphysin/Rvs (BAR) domain, and two C-terminal SH3 domains. It provides a functional link between dynamin, Rho GTPase signaling, and actin dynamics. It plays an important role in regulating cell junction configuration. The C-terminal SH3 domains of DNMBP bind to N-WASP and Ena/VASP proteins, which are key regulatory proteins of the actin cytoskeleton. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212732
Aligned: 4 rows
Threshold Bit Score: 117.782
Created: 12-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                     ##            # ##   
1UG1_A         19 LFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKP 75   human
XP_002937226 1271 LFQADRIYNAAQDLDVSLQEGDLVGVIKQQDPMGSQNRWLIDNGVTKGFVYCSFLKP 1327 western clawed frog
Q6XZF7       1289 LFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKP 1345 human
CBN81455     1384 LYQADRNFNAAQDLDVSIQEGDLVGVIKQQDPMGSNNRWLIDNGVTKGFVYTSFLKP 1440 European seabass

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