2YUP,2O2W


Conserved Protein Domain Family
SH3_Sorbs_2

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cd11782: SH3_Sorbs_2 
Click on image for an interactive view with Cn3D
Second Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains
This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the second SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212716
Aligned: 11 rows
Threshold Bit Score: 91.6426
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                 ##              # ##   
2YUP_A         19 EAVAQYTFKGDLevELSFRKGEHICLIRKvNENWYEGRITgtgRQGIFPASYVQV 73   human
2O2W_A          8 EAIAKFNFNGDTqvEMSFRKGERITLLRQvDENWYEGRIPgtsRQGIFPITYVDV 62   human
XP_002596050  134 SARAKYSFVGETqvELSLKKNDIVTLLRRvDNNWYEGQIGn--RQGIFPVSYVEV 186  Florida lancelet
XP_002425805  592 RARAKYDFVPQTslELPARKGDIITLTRKiDENWFEGKIGn--RTGIIPASYCHV 644  human body louse
ADB91437      370 QARAKYNFQAQSgiELSLNKGELVTLTRRvDGNWFEGKIAn--RKGIFPCSYVEV 422  fruit fly
XP_002119942  185 QAKAKFDFNGKTknELSFKKGDDLVLLKRvDDNWYKGKLGp--NTGILPVGYVQV 237  Ciona intestinalis
XP_002119942  116 PAKAKFDFNSRTgkELSVKRGQTVIITRRvDDNWYMTETPdgvKSGIIPVEYLKV 170  Ciona intestinalis
XP_003382594  327 LAKAKYNFTAKSskELSFNKNDVITLVKQvDENWYEGCLGd--EKGIVPVTFVQI 379  Amphimedon queenslandica
EFX79626      245 KGRVKFNFVAQTpiELSLVKGELVIITRQvDEHWLEGRIGq--RRGIFPISYVDI 297  common water flea
O35413       1038 EAIAKYNFNADTnvELSLRKGDRIILLKRvDQNWYEGKIPgtnRQGIFPVSYVEV 1092 Norway rat
NP_001014312  293 EAAALYTFNADLpvELSFRKGEVISITRRvDDHWLEGRIAgttRSGIFPISYVQV 347  zebrafish

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