2DL3,2NWM


Conserved Protein Domain Family
SH3_Sorbs_1

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cd11781: SH3_Sorbs_1 
Click on image for an interactive view with Cn3D
First Src Homology 3 domain of Sorbin and SH3 domain containing (Sorbs) proteins and similar domains
This family, also called the vinexin family, is composed predominantly of adaptor proteins containing one sorbin homology (SoHo) and three SH3 domains. Members include the first SH3 domains of Sorbs1 (or ponsin), Sorbs2 (or ArgBP2), Vinexin (or Sorbs3), and similar domains. They are involved in the regulation of cytoskeletal organization, cell adhesion, and growth factor signaling. Members of this family bind multiple partners including signaling molecules like c-Abl, c-Arg, Sos, and c-Cbl, as well as cytoskeletal molecules such as vinculin and afadin. They may have overlapping functions. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212715
Aligned: 12 rows
Threshold Bit Score: 92.4028
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #   #                 ##             # ##   
2DL3_A          9 PARAKFDFKAQTlkELPLQKGDIVYIYKQiDQNWYEGEHHg-RVGIFPRTYIEL 61   human
2NWM_A          3 AARLKFDFQAQSpkELTLQKGDIVYIHKEvDKNWLEGEHHg-RLGIFPANYVEV 55   human
XP_002596050   64 EARALYPFKAQNskELSFKKGDVIYLTRQvDKNWYEGEHNg-YVGIFPVNYIEV 116  Florida lancelet
ADY44974      227 TCTALYSFRAQSarELSFNRGDVIRVHRVvDVNWLEGERNg-QIGIFPSSYVQM 279  pig roundworm
XP_779984     422 SAIAVYPFTAQSkkELSFKKGDTIYLTREiDKNWVEGEHHg-NKGIFPRTYVEI 474  purple urchin
XP_002405563  196 LAKVLYNFLAQSpkEVSLRKGDLVYITRKiDRNWYEGEHHg-LVGIFPVSYVEG 248  black-legged tick
ADB91437      301 VARALFNFQGQTskELSFRKGDTIYIRRQiDANWYEGEHNa-MIGLLPASYVEI 353  fruit fly
CBJ25342      687 TATAVYKFEPRSarELPLNRGDIIRIIREvDGYWMEGERNg-RSGIFPTSYVQI 739  nematode
EFX79626      176 VARGLYNFVAQNarELSFQKGDIIFIRRQiDKNWYEGEHNa-MVGIFPVNYVEI 228  common water flea
ADY44974      289 KLIALFPFFARNrnELSLKKGEIVRYRRSiDANWLEGVNNrgEIGIFPKTYVQE 342  pig roundworm
CBJ25342      749 KMRAIYPFTARSdtELSLKRGEIITRRRQiDSNWLEGSNQigIVGIFPASYVEP 802  nematode
O35413        963 PAKAVYDFKAQTskELSFKKGDTVYILRKiDQNWYEGEHHg-RVGIFPISYVEK 1015 Norway rat

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