2KXC,3RNJ


Conserved Protein Domain Family
SH3_Irsp53_BAIAP2L

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cd11779: SH3_Irsp53_BAIAP2L 
Click on image for an interactive view with Cn3D
Src Homology 3 domain of Insulin Receptor tyrosine kinase Substrate p53, Brain-specific Angiogenesis Inhibitor 1-Associated Protein 2 (BAIAP2)-Like proteins, and similar proteins
Proteins in this family include IRSp53, BAIAP2L1, BAIAP2L2, and similar proteins. They all contain an Inverse-Bin/Amphiphysin/Rvs (I-BAR) or IMD domain in addition to the SH3 domain. IRSp53, also known as BAIAP2, is a scaffolding protein that takes part in many signaling pathways including Cdc42-induced filopodia formation, Rac-mediated lamellipodia extension, and spine morphogenesis. IRSp53 exists as multiple splicing variants that differ mainly at the C-termini. BAIAP2L1, also called IRTKS (Insulin Receptor Tyrosine Kinase Substrate), serves as a substrate for the insulin receptor and binds the small GTPase Rac. It plays a role in regulating the actin cytoskeleton and colocalizes with F-actin, cortactin, VASP, and vinculin. IRSp53 and IRTKS also mediate the recruitment of effector proteins Tir and EspFu, which regulate host cell actin reorganization, to bacterial attachment sites. BAIAP2L2 co-localizes with clathrin plaques but its function has not been determined. The SH3 domains of IRSp53 and IRTKS have been shown to bind the proline-rich C-terminus of EspFu. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212713
Aligned: 11 rows
Threshold Bit Score: 85.8368
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Structure:2KXC; Human IRTKS SH3 domain binds EspFu-R47 peptide; contacts at 4A.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ## #          ##           ##               ### #         ## ####   
2KXC_A          7 QKVKTIFPHTAGSn----KTLLSFAQGDVITLLIPEEk-----------DGWLYGEHDVsKARGWFPSSYTKL 64   human
3RNJ_A          8 MRVKAIFSHAAGDn----STLLSFKEGDLITLLVPEAr-----------DGWHYGESEKtKMRGWFPFSYTRV 65   human
Q6UXY1        327 RRVRALVSHSEGAn----HTLLRFSAGDVVEVLVPEAq-----------NGWLYGKLEGsSASGWFPEAYVKA 384  human
XP_785898     425 PRVQAVYTHAATG-----ETQLPFNEGDIIGLVGPKN------------NGWFYGHNYRsRRNGWFPITYTQP 480  purple urchin
XP_002413130  220 PRVRALYSYLSSG-----EHQLSFHEGDVIVLVGSRN------------GGWQYGVNLRnNRCGWFPIAYTEP 275  black-legged tick
XP_002738665  359 NQVCALYTHTASG-----KNQLSFSEGDVITVIGEKK------------NGWQFGQNMNsNKVGWFPIAYTES 414  Saccoglossus kowalev...
NP_001097583  364 PLVKALYAYMPSG-----ENQLSFEEGDRIALVGGKA------------KGWQFGENLRtQHFGWFPVAYTNA 419  fruit fly
XP_002607241  383 RKVRALFPHKAGDs----TNQLSFNEGDTISLLIDHPr-----------DGWHFGENDKtKRRGWFPYSYTQP 440  Florida lancelet
EFX77196      232 GTVRALYAYLSSG-----EHQINFLEGDLILLLGDEPvsfhsnangdrnKGWYYGENVRtGKRGWFPLAYTEQ 299  common water flea
CBY06922      294 KRVKATHPYAGDG-----QTKLQLETNDTVQLLIPQPr-----------DGWHYGENEKsGLRGWFPIQYTTK 350  Oikopleura dioica
CAF97892      502 THVEAVFAHTPGAspgggACLLHFLPGDDITLLISEPr-----------DGWHYGQNERtGRKGWFPFSYTQP 563  Tetraodon nigroviridis

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