Conserved Protein Domain Family
GH94N_NdvB_like

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cd11748: GH94N_NdvB_like 
Glycoside hydrolase family 94 N-terminal-like domain of NdvB-like proteins
The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-), amongst other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain [an (alpha/alpha)(6) barrel)]. The GH64N domain, as represented by this model, is found at the N-terminus of largely uncharacterized proteins, some members from Xanthomonas campestris and related organisms are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.
Statistics
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PSSM-Id: 213064
Aligned: 13 rows
Threshold Bit Score: 544.221
Created: 15-May-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4UP17        16 APSADG-MRYALYSPTAMPtAGGFLWNRRMMVQLTCRGYATAQFMQPEPAKYAHAPlLEARNFMMPEQPYYAHHPGRFFY 94  Xanthomonas cam...
ZP_08265216    3 LIDFEA-RLCRLNSPTALPlAAGYLWNKRMMIHMNARGYATAQFMQPEPSKYARAQiLEQKHFMLPEQGTYAHHPGRFFY 81  Asticcacaulis b...
YP_270364     10 DTAVDGlSNIKLTSPTTLPnATGFLWNRAMVMQVNCRGYVNSQFMQPEPAKYSYAPnMEAKSFIQPEHSYFSHHPGRFFY 89  Colwellia psych...
YP_004147916  15 AFVDQG-RRFVLASPTAMPqASTFLWNRKMLLQLNCRGYATAQFMQPEPAKYAHAPtLEARTFMQPEQPYYAHHPGRFVY 93  Pseudoxanthomon...
ZP_01116378    9 AFIEDG-QRYRLTSPTELPnADAFLWNAAMMIQATCRGYATAQFMQPGPAKYAHGPtLAAKTFMQPEHPYFAHHAGRFFY 87  Reinekea sp. ME...
YP_002313535  10 LFSMSQ-HSVQLNSATAMPkASGFLWNRQMMLHMNCRGYATAQFMQPEPAKYSHGPmLEAKTFMQPEHSYFAHHPGRFFY 88  Shewanella piez...
ZP_01907930    5 SHSRSG-DRVTLHSPTAMPqACGLLWNRRMLLHVNCRGFVTAQHMQPEPGKYAHAPfLEARTFMQPEQPLYAQHPGRFLF 83  Plesiocystis pa...
YP_004087135   3 LITLTS-DSCTLTSATAMPrASGFLWNRKMMLHSTCRGFVTAQHMQPEPAKYSHAPvVEGRTFMLPETAHYAHHPGRFVY 81  Asticcacaulis e...
ZP_01077250    1 MYIEGG-KRFLLSDPKLVPnSAGYLWNRHMMIHMNCQGYAVAQYMNPEPKKYAHAPnLAATSFMQPEQPYFANHPGRFFY 79  Marinomonas sp....
YP_003072460   3 KRVQNG-ERYELHSPTAMPqCAGFLWNKKMMIQVTCRGYAIAQHMQPEPAKYSYQPiVEGKIFMLPEQPMFAHTPGRFFF 81  Teredinibacter ...
EAA28929      10 RPTHNG-ERYEITNPTAMPkAAGFLWNQKMMIQITCRGFATAQFMQPEPAKYAYAPnIEAKTFMQPEPNYYAHHPGRFVY 88  Neurospora cras...
ADU28760       3 RSTENN-EYYELTSPTKIPkASGFLWNDNMMIHMNCRGYAVAQFMQPEPAKYSHSPnLEAKTFMQPEQPYYAHHPGRFVF 81  Bacillus cellul...
EGM75913       6 QATESG-QRYELYSATAMPqAAAFLWNKVMMIQQNCRGYATAQFMQPEPAKYAHAPnLEAKTFMQPEQPYYAHHPGRFVY 84  Rheinheimera sp...
Q4UP17        95 LKDEDTGALYSVPHEPVRAPAeTFEFSAGKHDVRWRVRH-DGIVVELCVSLPTDDAVELWECRVHNqsgRTRRLSLYPYF 173 Xanthomonas cam...
ZP_08265216   82 LKDRDSGDLRSAPYEPVRSAWdRFAFEAKPESIGWVLEQ-NGLRLELELSLPVDEAVELWELRLINg-eAPRRLSLYPAF 159 Asticcacaulis b...
YP_270364     90 LKDEDSGEIISLPYEPMRVQLdKFSFELGNSDIIWSIEH-HGLKITIKVNLTEDDLVECWFFSVTNltdTVRNISLYPYF 168 Colwellia psych...
YP_004147916  94 VRDEDSGSLFSAPHAPVNRVPdEFAFSVGAGDVAWTVHC-HGIELEMRVRLAAEDVAELWSVRVRNvsgRRRRISVYPYF 172 Pseudoxanthomon...
ZP_01116378   88 VKDHHTNTLWSAPYEPTRMPLdEFRFEPGLNDLRWVLRK-DDLEVTLVLSLADDHPVECWRVSVTNhstHARQIGLTPYF 166 Reinekea sp. ME...
YP_002313535  89 IKNEDTNELFSVPYEPVRCRSqSFSFVQSSAAINWLVEC-FGLSVSIEVNLSASDPLEMWQFEVKNtrdSAVNISIYPYF 167 Shewanella piez...
ZP_01907930   84 LRDEATGQAWSLPHEPMRRPVdSFRFEVGQAAIGWVLGV-GELEVSLTVSLPVDATAELWTASLRNagaAARRVSIYPCF 162 Plesiocystis pa...
YP_004087135  82 VRDLVSQRHFSVPHEPVRRAPkMFAFTQHPERLEWALEQ-DELDIRWSLVLPVDEAVELWRLEIRNrldIERALRIVPYF 160 Asticcacaulis e...
ZP_01077250   80 VRDDETGEMFSAPFAPMKTPLqSFEFLPGLNDICWRVKN-QDITIEITLALGEQSQAELWHVKVINssnSNRKLSLIPYF 158 Marinomonas sp....
YP_003072460  82 VKDEETGEFFSAPHEPVRAKPdTFVFSVGKSDLRWRVEK-LGIRVELQLTIPKQDVAELWQLKITNlsgRSRKISVYPYM 160 Teredinibacter ...
EAA28929      89 IKDEETGRLFSAPYEPVRAPHdRFVFSAGKTDVFWVIES-MGIRVEMTMGLPTHHVAELWTIKVKNlssRPRKLSVTPYF 167 Neurospora cras...
ADU28760      82 VKDEENGDIFSAPYEPVRVLPdNYTFAVGKNNIIWKVES-NGVLIEMKLSLPKDDPYELWEVKVKNlsnKKRKLSIYPYY 160 Bacillus cellul...
EGM75913      85 IKDENSGEIWSVPYEPVRKEAqNFVFSAGKSDIRWQLTLdSGLTVEWLLTLTPDQPLELWQLTVRNdskQNRSLSLYPYF 164 Rheinheimera sp...
Q4UP17       174 PIGYMSWMHQSGGYSPELgGIVCRSVTPYQKVDDYFRqrdFKDCTFLLHEQPPVAWDAQQMAFEGEGGLHAPs-AVQAEQ 252 Xanthomonas cam...
ZP_08265216  160 PLGLMSWMSQSAAYDPGLnAIVGDCVTPYQKVADYFKnkdLKDKVFLLSEQTPVAFETRQRPFEGEGGLHHPd-ALIADR 238 Asticcacaulis b...
YP_270364    169 SIGYMSWMNQSACYNEALnAIVAESVTPYQKVADYFTnkqLKDKTFFLSDTIPTAWHANQKDFEGEGGLHQPs-ALQAAL 247 Colwellia psych...
YP_004147916 173 PVGYMSWMNQAGRYSPELgGIVCSSVTPYQKVADWFRqrdFKDLTVLLHERAPDAWEANQSAFEGEGGLHAPdsVVRRET 252 Pseudoxanthomon...
ZP_01116378  167 PVGYASWMNQSGDYDTKLnAVIARCVTPYQKLEDYPKqkhFKDLTFFAADKKPQSWSARLQAFEGEGGLHNPd-ALQTGT 245 Reinekea sp. ME...
YP_002313535 168 SIGYMSWMNQSATFDSACnGIVATSVTPYQKVEDYPKlkdFKDLTFLIAEDKPDSWTANQYGFEGEGGLASPd-AINTPL 246 Shewanella piez...
ZP_01907930  163 SVGYMSWMNQSAAWDEGLlGLVARSVSPYQRLEDYPRiaqLKDWTALLADQRPDSWEARLEAFEGEGGWADPs-ALARPR 241 Plesiocystis pa...
YP_004087135 161 PVGYMSWMNQGAYFDAGLnAVIASSVTAYQKIDDYFKnqhLKDKTFLTCDRLADAFETRREDFEGEGGLSDP--DMLRSG 238 Asticcacaulis e...
ZP_01077250  159 PVGYMSWMNMGAHYDHTLnAVVCTSITPYQKLEDYEKnkhLKDITFFASDCPPDHFETSGVRFEGLGGLHNPdaLSECSD 238 Marinomonas sp....
YP_003072460 161 TLGFMSWMNQSARYREDLgGIVGSCVTPYQKLDDYFKnknLKDKTFFLHDRAPTHWEACRDIFEGEGGVQRPs-GVQADT 239 Teredinibacter ...
EAA28929     168 PIGYMSWMNQSAEWNHNLnGIVASCVTPYQKAADYFKnkyLKDKTYFLCDVPPDSWEASQQAFEGEGGLHNPs-ALQERN 246 Neurospora cras...
ADU28760     161 TVGYMSWMNQSGEYLEDIqAIVCSSITPYQKYQDYAKikeLNDKTFLLAEKKPFSWEVSQEVFEGEGGITLPt-GIQEEA 239 Bacillus cellul...
EGM75913     165 PVGYMSWMNQSGRYDADLkAIICSSVTPYQKYPDYFKnkfLKDKTFLLAERTPDFWEVNQQQFEGQGGLHAPs-AVQQPF 243 Rheinheimera sp...
Q4UP17       253 LGNHDAHYENPAAALQYRLSLAPDAATVYRFAFGPAKDDAEIAALRARYLSAEGFAA 309 Xanthomonas campestris pv. campestris ...
ZP_08265216  239 LANGISRYENPIAALQFDHDLSPGETVTHRFLFGPAFDHAEIQRVKDTWLSAEGFER 295 Asticcacaulis biprosthecum C19
YP_270364    248 LENVEARYETPVAVMQFQQTLLPSEQKNYQFLFGPAKNELEIADIKEKYLGHQQRNK 304 Colwellia psychrerythraea 34H
YP_004147916 253 LACGDALYETPTTALQYRLVLEADQEEELRFLFGPAHDEAEVRELRGRHLSAEGFAA 309 Pseudoxanthomonas suwonensis 11-1
ZP_01116378  246 LDNQAAIYECPACIMNFEATLKAGATEQWTFLFGPAEHETEIAERLAELLPEGKIEQ 302 Reinekea sp. MED297
YP_002313535 247 LASKVSAYEPPVAVMQYRHRLLPDEIRRHRFVFGPATNKAEVKQNRQRHFGDPKAFS 303 Shewanella piezotolerans WP3
ZP_01907930  242 LGRGEAHYETPIAALQYALELGAGEARQWRFVFAPARDAGELQQLRARLLAPGAFER 298 Plesiocystis pacifica SIR-1
YP_004087135 239 LKGGEALYETPAAVLQFDQTLDAHETQVWHFVFGPAFDEAEVARLKDAYLGAEAFER 295 Asticcacaulis excentricus CB 48
ZP_01077250  239 LSDQDCHYEMPACVMQFKIDLERHKSKEFNFVFGPALDKTEIQSVITQALGEKKLEQ 295 Marinomonas sp. MED121
YP_003072460 240 LGDGDALYETPAGIFQYRLAMPPRAVEDYRFILGPALDDAEIAQLREQFFTDPGFTA 296 Teredinibacter turnerae T7902
EAA28929     247 LSGSDARYETPTAAVQYKIALGTGEQQEYRFLFGPAHDEAEIGAMRSKYLSKEGFEQ 303 Neurospora crassa OR74A
ADU28760     240 LSKSDSRYEMPTAVFQYKLEMDVNEEQSYRFVFGPAKYDEDVTAVRNKYFEAENEAG 296 Bacillus cellulosilyticus DSM 2522
EGM75913     244 LACGDSDYETPACVMQYIVSLASGQTEQYRFVFGPAYDKAEVAHIRQQVFGTPESFD 300 Rheinheimera sp. A13L
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