4E0E


Conserved Protein Domain Family
GH94N_like_1

?
cd11747: GH94N_like_1 
Click on image for an interactive view with Cn3D
Glycoside hydrolase family 94 N-terminal-like domain of uncharacterized function
The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cellobiose phosphorylase and many other members. Their N-terminal domain is involved in oligomerization and may play a role in catalysis, but it is separate from the catalytic domain. This GH64N domain also occurs as a standalone domain in distantly related proteins of unknown function, as represented by this model, which also includes N-terminal GH94N-like domains of bacterial rhamnosidases and as found at the C-terminus of polygalacturonases.
Statistics
?
PSSM-Id: 213063
Aligned: 19 rows
Threshold Bit Score: 195.654
Created: 15-May-2012
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Conserved Features/SitesClick to see Conserved Features Help
 
homodimer
Conserved site includes 36 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:4E0E: Bacteroides thetaiotaomicron hypothetical protein (Bt_4147) forms a homodimer, contacts at 4A

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                              # #                    #####     # #       
4E0E_A          1 GAQQLTPPAGTFRLGISk-GTDSHWLAPQekvKGIAFRWK--------------------ALPDT--RGFILEVAVTSlq 57   Bacteroides t...
YP_005006530   83 FALYMPGMGGNFKLGLIa-GNKSIWLTNAksiKAIYRPGAmlyevkdpllgagsmqiavlALADS--EGMIIKTQFVNvp 159  Niastella kor...
ZP_10107560    74 FAMYMPGMGGNFKLGIItqDGSSKWLTECdsiTTVYTPGImnyqisdsllkqgsihlkvvALAKS--EGFMLQATSIDip 151  Joostella mar...
YP_001196551   72 FAMYMPGMGGNFKLGLSn-GKESKWITEAakiDTRYVLGTmqytiedpilegsklfidvvALKES--EGFIVKVYGQKis 148  Flavobacteriu...
ZP_03967640    77 FALYMPGMGGNLQFVLQs-GDKMIRFDDLtlaDVRYASGSmvytindnvlgggqlqitvlAQADE--EGMIVEVNSKNvp 153  Sphingobacter...
ZP_01061997    80 FALYLPGMGGNFKLGISk-ETESKWITEAdsiTTKYTPGMmeyeihdallgngffkltvlASAET--EGFLLKVEEHNip 156  Leeuwenhoekie...
YP_004315723   81 FALYLPGMGGNLQFVLTd-GKNYKRLIDAdhiETRYRPGTmiywikdtllgdgrltvqvlAQAEN--EGLILEVEGENit 157  Sphingobacter...
YP_004089381   90 FSLYLPGRGGNLRLGLRt-HAGIKWINDAqdtESRYRPGEmlytirdpli-gatgrlvidVIADHasEGLLLRASGTAlp 167  Asticcacaulis...
YP_005057676  104 FSLYLPGHGGNLRLGVSgmDGADRWLFQAssvTMRYIEGRllyeirdall-gnqavlrveVLTVG--AGLWVEVSGANlp 180  Acidobacteriu...
YP_004219615  100 FSLYMPGHGGNLRLGFTa-RGTAKWLSQAdeiVATYHAGRmsytindaalgsnqlrldvvTAAQG--PGLHIRVQSTLak 176  Granulicella ...
Feature 1                                                # ####   #    #   ##        #     ###    
4E0E_A         58 QADTLFWSFGNCQP----------------------DXDINVFSVEg-QAFTCYYGESX-------KLRTLQAVTPt-DD 106  Bacteroides t...
YP_005006530  160 PKVALCWVYGGASGkkfsrdgdigadpessfylqpdYCKDNTYSISk-NSFHLLMGGTElpgtvnkNLKQLSAIVPpaSV 238  Niastella kor...
ZP_10107560   152 ETVKLIWVYGGASGkkfhrdgdigadpesvfylqpkYCINNQYSVTn-NSFIVKYGSENnke-ktgNNRTMSGVFPt-SE 228  Joostella mar...
YP_001196551  149 KNINLIWAFGGAIGkkfsrdgdigadpesvfylqpnYCLNNKYTLKk-ESFLLDYGSESnkq-ktgNNKSLSGFFPn-SE 225  Flavobacteriu...
ZP_03967640   154 DGIALIAVYGGASGktfsragdigadpessfyllpeYCEHNTYQINk-NNFQVSYPNKKg------ELQYLAGSFSgkPE 226  Sphingobacter...
ZP_01061997   157 EAVGLHWLFGGASGkkfhrdgdigadpesvfylqpeYARHNSYDLKe-NGFTLQFNWDAks---qtNKKTLTAAVPe-GQ 231  Leeuwenhoekie...
YP_004315723  158 HSTKLLAIYGGASGqnfsragdigadpessfyllpqNCEANTFTLNn-RGFHLNFLNKKk------QRQELFGAFSgqPS 230  Sphingobacter...
YP_004089381  168 KGTELVFAYGAGNGqrgnrdg---------digtekVPISQYFQFKpdYAEGTRYGTDAqvfhadsRTARLTGTVSvpAA 238  Asticcacaulis...
YP_005057676  181 SGIALTWAFAGVSGrkgkrng---------digcevEPVSRFFQVRpeECRDNLWSVRGteaevtaRKIRIQLQAPeaSE 251  Acidobacteriu...
YP_004219615  177 DEVQMLYAFAGASGrkgkrgg---------digcesEPVSQFFQVRpmECAGNNYTIEGhtarltsKAVNLSFDFPpgTT 247  Granulicella ...
Feature 1           #                                       ## # # #    #### #  ## #
4E0E_A        107 IRLSNGRQDKTPLLLYe----SGKRTDRPVLAGRCPLAaNSKLYFCFYEQn--aRADYNYFXLPDL 166  Bacteroides thetaiotaomicro...
YP_005006530  239 IKITDAAQQQDPLTLY-----QSNASATPAIAGKLPVT-AGAQYFLIQPTd---TIQLAYNKLVQI 295  Niastella koreensis GR20-10
ZP_10107560   229 IKIASASNQENPLAVY-----QSEKDSFPVIIGKVNSL-KQPLYWKFENS----DALAIEASLESD 284  Joostella marina DSM 19592
YP_001196551  226 IRLADANIQNKPLELF-----KSKAETLPLISGKINSVsEKANYWLFVPEi--sKVNYTQKTIAQL 284  Flavobacterium johnsoniae U...
ZP_03967640   227 VRLINASALKDVDQLW-----TSKASTTPAIAAKYKLNqTATAYVAIQRGqg-kGAKAPQLSLQKL 286  Sphingobacterium spiritivor...
ZP_01061997   232 LNLGSAHAIQNPNTLQ-----RATLDSLPVIYGTVDRSaAKTYYWNIEHT----TGDTSDKVLSSA 288  Leeuwenhoekiella blandensis...
YP_004315723  231 LKLLDADKLTVLPELW-----ESSSIDRPVLGAQYLLKdEHPVYIAIQREksqaPLDVVFQQAEEK 291  Sphingobacterium sp. 21
YP_004089381  239 LKLSDARKWSDAAQLL-----ASDRAAIQVVTGHVALG-TAPVYLAIQVTr--rGAAEELGTYRDV 296  Asticcacaulis excentricus C...
YP_005057676  252 MRIGDGTLWNHGWSALwssgaETVKLEFPALTGCVALN-GSAIQLRLNVLe---GATQPSLPSPPL 313  Acidobacterium sp. MP5ACTX8
YP_004219615  248 ALIGDASRWNDGWQALad--sAASGPALPALLASVKLS-ATPLHLRINGDvt-iDAEEAYVRRCAQ 309  Granulicella sp. MP5ACTX9

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap