Conserved Protein Domain Family
ADDz_Dnmt3b

?
cd11728: ADDz_Dnmt3b 
ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
ADDz_Dnmt3b is an active catalytic domain of Dnmt3b. Dnmt3b is a member of the Dnmt3 family and is a de novo DNA methyltransferases that has an N-terminal variable region followed by a conserved PWWP region and the cysteine-rich ADDz domain. DNA methylation is an important epigenetic mechanism involved in diverse biological processes such as embryonic development, gene expression, and genomic imprinting. The methyltransferase activity of Dnmt3a is not only responsible for the establishment of DNA methylation pattern, but is also essential for the inheritance of these patterns during mitosis. Dnmt3b is ubiquitously expressed in most adult tissues. The ADDz_Dnmt3 domain is a PHD-like zinc finger motif that contains two parts, a C2-C2 and a PHD-like zinc finger. PHD zinc finger domains have been identified in more than 40 proteins that are mainly involved in chromatin mediated transcriptional control; the classical PHD zinc finger has a C4-H-C3 motif that spans about 50-80 amino acids. In ADDz, the conserved histidine residue of the PHD finger is replaced by a cysteine, and an additional zinc finger C2-C2 like motif is located about twenty residues upstream of the C4-C-C3 motif. A knockout of Dnmt3b has been shown to be lethal in the mouse model.
Statistics
?
PSSM-Id: 277254
Aligned: 4 rows
Threshold Bit Score: 245.921
Created: 15-Mar-2012
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
putative Zn
Feature 1: putative Zn binding site [ion binding site], 12 residue positions
Conserved feature residue pattern:C C C C C C C C C C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:ADDz is a cysteine-rich PHD-like domain that binds to three zinc ions
  • Comment:Based on the structure evidence that Human Dnmt3l (2PVC) interacts with 3 Zinc ions through its ADDz domain.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1             #  #                #  #                   #  #        #    #    #  #       
NP_787044     411 LEDGCLSCGrknpvSFHPLFEGGLCQTCRDRFLElfYMYDDDGYQSYCTVCCEGRELLLCSNTSCCRCFCVECLEVLVGT 490  human
NP_001019999  425 LEDSCLSCGrrnpaTFHPLFEGGLCHTCRDRFLElfYMYDEDGYQSYCTVCCEGKELLLCSNASCCRCFCVECLEVLVGR 504  chicken
NP_001020621  394 IEEFCLSCGktrvaTFHPLFEGGLCLTCKDAYLEnsYMYDDDGYQSYCTVCCGGREMLLCGNANCCRCICVDCLDILVGA 473  zebrafish
NP_001018312 1011 IEDFCLSCGssnteTFHPLFKGSLCIKCKENFTEtlYRYDDDGYQSYCTVCCAGLEVILCGNASCCRCFCKDCLNVLVGP 1090 zebrafish
Feature 1                      #  #                       
NP_787044     491 GtaaeaklqEPWSCYMCLPQRCHGVLrrrkDWNVRLQAFF 530  human
NP_001019999  505 GssakakeqEPWNCYMCQPQRSYGVLqrxqDWSSRLQDFF 544  chicken
NP_001020621  474 GaansarnlDPWRCYMCQPLQQYGVLkkrhDWSLKLQEFF 513  zebrafish
NP_001018312 1091 GtfdklkevDPWSCYVCLPSKCYGVLklrtDWSVRVQEFF 1130 zebrafish

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap