Conserved Protein Domain Family
THUMP_SPOUT

?
cd11718: THUMP_SPOUT 
THUMP domain associated with SPOUT RNA Methylases
Members of this archaeal protein family are characterized by containing an N-terminal THUMP domain and a C-terminal SPOUT RNA methyltransferase domain. No functional information is available The THUMP domain is named after thiouridine synthases, methylases and PSUSs. The domain consists of about 110 amino acid residues. It is predicted to be an RNA-binding domain and probably functions by delivering a variety of RNA modification enzymes to their targets.
Statistics
?
PSSM-Id: 212587
Aligned: 15 rows
Threshold Bit Score: 184.792
Created: 25-Jan-2012
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
YP_004484308   3 FIIKTQkgYEGIAANYLKEEVedIKVHITPhGYSGIViVESEDDITDka-----lkIPEIERVLKVlFEVPadLEKIVSL 77  Methanotorris i...
YP_004342501  10 LLIKTLvgMEYIAASYIRERLd-ADIEVRPsGFLGLViVHSDEIERIs-------dIPEIETIIPIsIECKadINEILKQ 81  Archaeoglobus v...
O28057         2 LLVKTLreMEYVAASHIKDAIgdVEIEIRPsGFLGLLiVHCDESLKEkl-----eeIPEIETIIPVlVECEakLDEILSK 76  Archaeoglobus f...
YP_001012638  12 ILVKTVlgMERVAASYIAEIDpgAEVIPAPrGFKGLVlVRPSRDKYKvaee-lekrIPEAEKIVVIeGCAPadPREIARV 90  Hyperthermus bu...
Q9V2I9         3 FIVKTQmdMEAVAGNYIKEVLpeAKVTIAPgGYPGLIiVESEDEKAMeki----leVPEVEKVFPVlIEVPatLDDIKNA 78  Pyrococcus abyssi
YP_921170      6 LIITCKlgFERVVASYVEELDpaAEVEATPqGFAGLVlVRPGNLKAEelaravkerVPEAEKVFVAdAECNasIEEIVRC 85  Thermofilum pen...
YP_004004782   3 FLITTPrgLEGTAANYIKEKIkdADVWITPmGYAGLVlVKTKENCEKql-----keIPEVERVIPVmFEVPakLDEILST 77  Methanothermus ...
YP_003859273   6 IIVTCRlgMEKIVASYIKDIEtgVEILPAPfNFMGLIlVAGSRDRYRlade-ikrsVPEVEKIYIVdAIAKsdIQSIVDA 84  Ignisphaera agg...
Q57864         3 FIIKTQkgFENIVVNNLKEIVddFNYIVSPdGYQGIViVESDEDIEDki-----lqIPEVERVLKVyFETEtdFDKIVNL 77  Methanocaldococ...
YP_001040854  12 ILIKTSlgFEKIVATRIQELDpeAKVLPEPmNFKGLVlVKNGRFSRDelveqiarnVVEAEKIIPIdKATIadPNVICEE 91  Staphylothermus...
YP_004484308  78 ADKIAehi-negESFAVETKRRGKHnFSSVDVNIVLGAKIKDltNAEVNLDYPDKVVYVEIIkDIAYICI 146 Methanotorris igneus Kol 5
YP_004342501  82 APKIAkli-gnaKTFAIKTKRRGTHdFTSADVNIRLGAEVKKltGCDVDLISPEKTVYVEIIgDRALIGV 150 Archaeoglobus veneficus SNP6
O28057        77 AEVVAekv-kgaRTFAIRTKRRGTHdFTSLDVNLDLGDRIREltGCEVDLNFPDKAVYVEIIgKRAFIGV 145 Archaeoglobus fulgidus
YP_001012638  91 AAELApqyissnETFAVRTVRRGRHnFTSIDVNVVVGDAVRRatGARVNLRFPDKVVAVEIIaDRAFIAF 160 Hyperthermus butylicus DS...
Q9V2I9        79 AEEIVkhi-kegETFAVRTKKRGKKdYSSVDVNVVLGARIKDltNAEVNLSYPDKVVQVEIIgDKAYISV 147 Pyrococcus abyssi
YP_921170     86 AVGISagi-sreESFAVRTVRRGSHgFTSLDVNVAVGSAVKEatGARVDLENPDKVIFVQILqDKAYLSL 154 Thermofilum pendens Hrk 5
YP_004004782  78 AKNISkhi-netETFSVETTRRGKHeFTSMDVNIKLGRKIEEltGADVNLTLPDKKVLVEIIgDKAYISV 146 Methanothermus fervidus A...
YP_003859273  85 VKRVVqgainpnESFAVRTVRRGRHsFTSIDVNIAVGSIVKDvtGARVDLDNPDKVVFIQIIqDYAYISI 154 Ignisphaera aggregans DSM...
Q57864        78 AEKIKdyi-kedETFAVETKKRGKHdFSSTDINIVLGAKIKDltNASVDLNNPDKVVHVEVFkNKTYVSI 146 Methanocaldococcus jannas...
YP_001040854  92 IRDVVtekidekKSFAVKTTRRGKHgFTSIDVNVIVGDCIRKytGASVNLRYPDIIVYVEIKrSSSLIQI 161 Staphylothermus marinus F1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap