2WM9,2WMN


Conserved Protein Domain Family
DHR2_DOCK9

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cd11698: DHR2_DOCK9 
Click on image for an interactive view with Cn3D
Dock Homology Region 2, a GEF domain, of Class D Dedicator of Cytokinesis 9
Dock9, also called Zizimin1, is an atypical guanine nucleotide exchange factor (GEF) that lacks the conventional Dbl homology (DH) domain. As a GEF, it activates the small GTPase Cdc42 by exchanging bound GDP for free GTP. It plays important roles in spine formation and dendritic growth. DOCK proteins are divided into four classes (A-D) based on sequence similarity and domain architecture; class D includes Dock9, 10 and 11. All DOCKs contain two homology domains: the DHR-1 (Dock homology region-1), also called CZH1 (CED-5, Dock180, and MBC-zizimin homology 1), and DHR-2 (also called CZH2 or Docker). The DHR-1 domain binds phosphatidylinositol-3,4,5-triphosphate. This alignment model represents the DHR-2 domain of Dock9, which contains the catalytic GEF activity for Cdc42. Class D DOCKs also contain a Pleckstrin homology (PH) domain at the N-terminus.
Statistics
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PSSM-Id: 212571
Aligned: 7 rows
Threshold Bit Score: 863.184
Created: 20-Mar-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 45 residues -Click on image for an interactive view with Cn3D
Feature 1:Cdc42 binding site [polypeptide binding site]
Evidence:
  • Structure:2WM9: Human Dock9 DHR-2 domain binds Cdc42; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2WM9_A          8 ELRKTWLDSMARIHVKNgDLSEAAMCYVHVTALVAEYLTRKg--------------------------------vFRQGC 55   human
Q6PF84        254 ELRKTWLDSMARIHVKNgDLSEAAMCYVHVTALVAEYLTRKeadlalqreppafp------yshstcqrkswggmFRQGC 327  house mouse
XP_416974    1609 ELRKTWLDSMARIHVKNgDLSEAAMCYVHVAALVAEYLTRKg--------------------------------mFRQGC 1656 chicken
XP_003459679  947 ELRKTWLDSMARIHNKNgDLSEAAMCYVHVAALVAEYLWRKg--------------------------------mFRQGC 994  Nile tilapia
CAG05927     1710 ELRKTWLDSMARIHVKNgDLSEAAMCYVHVAALVAEYLRRKgasavshtaaispaslflnaalhlsssrllcagmIKQGC 1789 spotted green...
XP_001920312 1615 ELRKTWLDSMAKIHVKNgDLSEAAMCYVHVAALVAEYLKRKg--------------------------------mFRQGC 1662 zebrafish
2WMN_A          8 ELRKTWLDSMARIHVKNgDLSEAAMCYVHVTALVAEYLTRKg--------------------------------vFRQGC 55   human
Feature 1                                                                                         
2WM9_A         56 TAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLEQCADGLWKaeRYELIADIYKLIIPIyekrRDFERLAHLYDTLH 135  human
Q6PF84        328 TAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLEQCADGLWKaeRYELIADIYKLIIPIyekrRDFERLAHLYDTLH 407  house mouse
XP_416974    1657 IAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLEQCADGLWKaeRYELIADIYKLIIPIyekrRDFERLAHLYDTLH 1736 chicken
XP_003459679  995 SAFRVITPNIDEEAAMMEDVGMQDVHFSEEVLMELLEECVDGLWKaeRYELIADVYRLIIPIyeqcRDFEKLAHLYDRLH 1074 Nile tilapia
CAG05927     1790 TAFRVITPNIDEEAAMMEDVGMQDVHFNEDVLMELLEECADGLWKaeRYELISDIYKLIIPIyeqrRDFEKLAHLYDTLH 1869 spotted green...
XP_001920312 1663 CAFRVITPNIDEEAAMMEDVGMQDVHFNEEVLMELLEACADGLWKaeRYELISDIYKLIIPIyeqrRDFEKLAHLYDTLH 1742 zebrafish
2WMN_A         56 TAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLEQCADGLWKaeRYELIADIYKLIIPIyekrRDFERLAHLYDTLH 135  human
Feature 1                   #### #                                          ## #### ##            
2WM9_A        136 RAYSKVTEVMHSGRRLLGTYFRVAFFGQg--------------fFEDEDGKEYIYKEPKLtPLSEISQRLLKLYSDKFGs 201  human
Q6PF84        408 RAYSKVTEVMHSGRRLLGTYFRVAFFGQg--------------fFEDEDGKEYIYKEPKLtPLSEISQRLLKLYSDKFGs 473  house mouse
XP_416974    1737 RAYSKVTEVMHTGKRLLGTYFRVAFFGQaaqyqftdsetdvegfFEDEDGKEYIYKEPKLtPLSEISQRLQKLYSDKFGs 1816 chicken
XP_003459679 1075 RAYTKVMEVMHSGKRLLGTYFRVAFFGQg--------------fFEDEDGKEYIYKEPKFtPLSEISQRLLKLYSDKFGq 1140 Nile tilapia
CAG05927     1870 RAYSKVTEVMHTGKRLLGTYFRVAFFGQyqftds-----eaegfFEDEDGKEYIYKEPKFtPLSEISQRLLKLYSEKFGq 1944 spotted green...
XP_001920312 1743 RAYTKVMEVMHSGKRLLGTFFRVAFFGQg--------------fFEDEDGKEYIYKEPKFtPLSEISQRLLKLYSDKFGq 1808 zebrafish
2WMN_A        136 RAYSKVTEVMHSGRRLLGTYFRVAFFGQg--------------fFEDEDGKEYIYKEPKLtPLSEISQRLLKLYSDKFGs 201  human
Feature 1               ###                # #                            # #      ##     #       
2WM9_A        202 eNVKMIQDSGKVNPKDLDSkYAYIQVTHVIPFFDEKELQERKTEFERSHNIRRFMFEMPFTQTGkRQGGVEEQCKRRTIL 281  human
Q6PF84        474 eNVKMIQDSGKVNPKDLDSkFAYIQVTHVTPFFDEKELQERRTEFERCHNIRRFMFEMPFTQTGkRQGGVEEQCKRRTIL 553  house mouse
XP_416974    1817 eNVKMIQDSGKVNPKDLDSkYAYIQVTHVVPYFEEKELQERKTDFERTHNIRRFMFEMPFTQAGkRQGGVEEQCKRRTIL 1896 chicken
XP_003459679 1141 eNVKIIQDSGKVNPKDLDSkYAYIQVTHVMPYLDEKELEDRRTDFEKSHNIWRFVFETPFTMSGkKQGGVEEQCKRRIVL 1220 Nile tilapia
CAG05927     1945 eNVKMIQDSGRINPKDLDSkYAYIQVTHVTPYLEEKELVDRKTDFEKCHNIRRFVFEMPFTISGkKQGGVEEQCKRRTIL 2024 spotted green...
XP_001920312 1809 eNVKMIQDSGRVNPKDLEAkFAYIQVTHVTPYLEEKELEERKTDFERSHNIRRFVFETPFTESGkRHGGVEEQCKRRTVL 1888 zebrafish
2WMN_A        202 eNVKMIQDSGKVNPKDLDSkYAYIQVTHVIPFFDEKELQERKTEFERSHNIRRFMFEMPFTQTGkRQGGVEEQCKRRTIL 281  human
Feature 1                                        ##  #             # #   #  ###  #### ##  #       
2WM9_A        282 TAIHCFPYVKKRIpvMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSaevDMIKLQLKLQGSVSVQVNAGPLAYARAFLDD 361  human
Q6PF84        554 TAIHCFPYVKKRIpvMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSaevDMIKLQLKLQGSVSVQVNAGPLAYARAFLDD 633  house mouse
XP_416974    1897 TAIHCFPYVKKRIpvMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSaevDMIKLQLKLQGSVSVQVNAGPLAYARAFLDD 1976 chicken
XP_003459679 1221 TTTHCFPYVKKRIavMYQHQTDLSPIEVAIDEMSAKVNELRQLCSAsevDMIRLQLKLQGSISVQVNAGPLAYARAFLDS 1300 Nile tilapia
CAG05927     2025 TTTHCFPYVKKRIavMYQHHTDLSPIEVAIDEMSKKVAEIKQLCSSsevDMIRLQLKLQGSISVQVNAGPLAYARAFLDD 2104 spotted green...
XP_001920312 1889 TTTHCFPYVKKRIavMYQHHTDLSPIEVAIDEMSGKVAELRALCATsevDMIRLQLKLQGSISVQVNAGPLAYARAFLDD 1968 zebrafish
2WMN_A        282 TAIHCFPYVKKRIpvMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSaevDMIKLQLKLQGSVSVQVNAGPLAYARAFLDD 361  human
Feature 1                             #                 ## ##  #               
2WM9_A        362 TNTKRYPDNKVKLLKEVFRQFVEACGQALAVNERLIkeDQLEYQEEMKANYREMAKELSEI 422  human
Q6PF84        634 TNTKRYPDNKVKLLKEVFRQFVEACGQALAVNERLIkeDQLEYQEEMKANYREMAKELSDI 694  house mouse
XP_416974    1977 TNTKRYPDNKVKLLKEVFRQFVEACGHALGVNERLIkeDQLEYQEEMKANYREMAKELSEI 2037 chicken
XP_003459679 1301 SSAKKYPDNKVKQLKEVFRQFVDACGQALGVNERLIkeDQQEYHDEMKANYRNLTRELSNI 1361 Nile tilapia
CAG05927     2105 TSTKKYPDNKVKQLKEVFRHFVEACGHGLGINERLIkeDQQEYHDEMKANYRELARELSII 2165 spotted green pufferfish
XP_001920312 1969 ACAKKYPDNKVKQLKEVFRQFVEACGQALAVNERLIkeDQQEYHDEMKASYRDLARELSNI 2029 zebrafish
2WMN_A        362 TNTKRYPDNKVKLLKEVFRQFVEACGQALAVNERLIkeDQLEYQEEMKANYREMAKELSEI 422  human

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