2WM9


Conserved Protein Domain Family
DHR2_DOCK_D

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cd11694: DHR2_DOCK_D 
Click on image for an interactive view with Cn3D
Dock Homology Region 2, a GEF domain, of Class D Dedicator of Cytokinesis proteins
DOCK proteins are atypical guanine nucleotide exchange factors (GEFs) that lack the conventional Dbl homology (DH) domain. As GEFs, they activate small GTPases by exchanging bound GDP for free GTP. They are divided into four classes (A-D) based on sequence similarity and domain architecture; class D, also called the Zizimin subfamily, includes Dock9, 10 and 11. Class D Docks are specific GEFs for Cdc42. Dock9 plays important roles in spine formation and dendritic growth. Dock10 and Dock11 are preferentially expressed in lymphocytes. All DOCKs contain two homology domains: the DHR-1 (Dock homology region-1), also called CZH1 (CED-5, Dock180, and MBC-zizimin homology 1), and DHR-2 (also called CZH2 or Docker). The DHR-1 domain binds phosphatidylinositol-3,4,5-triphosphate. This alignment model represents the DHR-2 domain of class D DOCKs, which contains the catalytic GEF activity for Cdc42. Class D DOCKs also contain a Pleckstrin homology (PH) domain at the N-terminus.
Statistics
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PSSM-Id: 212567
Aligned: 12 rows
Threshold Bit Score: 636.305
Created: 20-Mar-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 46 residues -Click on image for an interactive view with Cn3D
Feature 1:Cdc42 binding site [polypeptide binding site]
Evidence:
  • Structure:2WM9: Human Dock9 DHR-2 domain binds Cdc42; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2WM9_A          8 ELRKTWLDSMARIHVKNgDLSEAAMCYVHVTALVAEYLTRKgvfrqgctafrvitpnid--------------------- 66   human
XP_002593328  188 ELRKTWLESMARIHNKNgDFSEAAMCYIHVAALVAEYLKRKgvypkgcaafriispniea-------------------- 247  Florida lancelet
XP_002154413 1467 ELRQTWLESMAIIHEKKgDYSEAAMCYIHSAALVAEYLKAKsmyahgcssfkaispnlip-------------------- 1526 green hydra
XP_002120284  658 ELRKTWLESMARVHKKNgNYSEVAMCYVHIAALVAEYLKRKgmlakgcalfrmispnvek-------------------- 717  Ciona intesti...
NP_609125    1818 ELRHTWLVTMARNHEQNgNLSEAACCHLHIAALMCEYLRLKg-------------------------------------- 1859 fruit fly
XP_002108822  231 QLRQYWLEQMCLTHESHgNISEAALCQVHIAALIAEYMQRKmnydhscrvftrvsnnive-------------------- 290  Trichoplax ad...
EFX79894     1658 ELRKTWLETMAHHHTRLgNWSEVAQCRIHVAALITEYLYRR--------------------------------------- 1698 common water ...
XP_003246228 1695 ELRLTWLQTMARNHDDNgDFSEAACCRLHIAALVAQYRKLKgtqgwgaeafgkissniarde------------------ 1756 pea aphid
XP_792492    1558 ELRRTWLDSMARIHIENgNYSEAAHCYIHIAALIAEYLKRKgtysqgvqafrsispnieg-------------------- 1617 purple urchin
AAH47713      334 ELRKTWLDSMAKIHVKNgDFSEAAMCYVHVAALVAEFLHRKklfpngcsafkkitpnid--------------------- 392  human
EFN81354     1665 ELRHTWLETMARNHARDgNFSEAACCQLHIAALMAEYLKLRkvhswgaeafdqisvnisk-------------------- 1724 Harpegnathos ...
Q8BZN6       1697 ELRRTWLESMAKIHARNgDLSEAAMCYIHIAALIAEYLKRKgywkmekictppllpedtqpcdsnlllttpgggsmfsmg 1776 house mouse
Feature 1                                                                                         
2WM9_A         67 ------------eeasmmedvgmqdvhfneDVLMELLEQCADGLWKaeRYELIADIYKLIIPIye-krRDFERLAHLYDT 133  human
XP_002593328  248 ------------eesaikddsgiedvhyteDTLVELLERCAQALEKaeRYEVLGEVYKLIIPIye-krREFQRLADAYRH 314  Florida lancelet
XP_002154413 1527 -----------desrlnddegdtaetrytlKNLIELLEVSVERLKLaeRYEIVGEVYKLAIPLye-eeRNYQCLALAYGV 1594 green hydra
XP_002120284  718 ------------eelamkedsgmqdvpyneDMLIDMLHTCVETLQQaeRYELLATIFAMITPYye-krRDYESLVNVYDT 784  Ciona intesti...
NP_609125    1860 -----------------------------gCTLSWSSTAFGKISTNipLDEQGLKLDAGAQDSqyteqMLLEQLKLCADF 1910 fruit fly
XP_002108822  291 ------------eenlqedkaaedvigyteDLYVEMMEKCVKLLTIaeRYELVAEIYRLLLPIye-rqRHFQQLADAHGQ 357  Trichoplax ad...
EFX79894     1699 ------------------------------GLRQQGCETFSSLSPNivQDESNLRLDTGIHDTqydeaMLLEQLEECSRA 1748 common water ...
XP_003246228 1757 ---------tglqldsgggsvaandtlygeQALLDRLEACAVSLRRaeLYECFGELYKLVIPVye-hrKDYHALADCYRT 1826 pea aphid
XP_792492    1618 ------------eekgiksdsgmqdvqyteDNLLAELELCAEGLQKaeRYESMGEVYKLIIPFye-kkRDFQRLALAYGK 1684 purple urchin
AAH47713      393 ------------eegamkedagmmdvhyseEVLLELLEQCVDGLWKaeRYEIISEISKLIVPIye-krREFEKLTQVYRT 459  human
EFN81354     1725 ------------decnlkldagvqdihyneCLLLEQLEVCADTLEKaeRFELLGHLYRLIVPMye-ekRNYEALANCYSH 1791 Harpegnathos ...
Q8BZN6       1777 wpaflsitpnikeegamkedsgmqdtpyneNILVEQLYMCVEFLWKseRYELIADVNKPIIAVfe-kqRDFKKLSDLYYD 1855 house mouse
Feature 1                     ####                                               ## #### ##       
2WM9_A        134 LHRAYSkvtevmHSGRRLLGTYFRVAFFGqg-----------------fFEDEDGKEYIYKEPKLtPLSEISQRLLKLYS 196  human
XP_002593328  315 LTQSYEkvvtvmQSGRRLLGTYFRVAFYGqg-----------------fFEEEDGREYIYKEPKVtSLSEINQRLERLYS 377  Florida lancelet
XP_002154413 1595 LKESYEkvvqvtISGKRILGRYYRVAFFGrv----------------fvFKESDGKEFVYKEPKVtSLSEISLRLSEKYN 1658 green hydra
XP_002120284  785 MKRGYEkvlevnRNGKRLLGKFFRVALYGqs-----------------hFEEEDGKQYIYKEPKLtQLSEISQRLQATYG 847  Ciona intesti...
NP_609125    1911 LDRAERfec-lgELYKLILPMYERDRSYQdlahcyehltqaynkivemyFEEDHAIEFVYKEPKLtSLSEISERLAKQYK 1989 fruit fly
XP_002108822  358 LHEAYKkivevmSSGNRFLGTYYRVSFFGq------------------eFEDDGGKEYIYKEPKVtGLSEISQRLSAMYG 419  Trichoplax ad...
EFX79894     1749 VEKAERyem-qlEIYRLILPTYEKQRDYVslaecfsvlsqacsranearFGDEAGTEYIYKEPKVtNLSEIAERLNRMYC 1827 common water ...
XP_003246228 1827 VGIAYDtavsarQSGRRMLGRYYRVTLFGqa-----------------yFGDQHGVEFVYKEPKLtPLSDVSERLLCQYG 1889 pea aphid
XP_792492    1685 LSKAYEkvmklqGTGKLLLGNYFRVAFFGq------------------hFEEDDGKEYIYKEPKVtTLQSICERLQALFS 1746 purple urchin
AAH47713      460 LHGAYTkilevmHTKKRLLGTFFRVAFYGqs-----------------fFEEEDGKEYIYKEPKLtGLSEISLRLVKLYG 522  human
EFN81354     1792 LAQACNkivevtRTGKRLLGRFYRVAFFGta-----------------yFEEETGQEYIYKEPKVtSLSEISERLLRLYN 1854 Harpegnathos ...
Q8BZN6       1856 IHRSYLkvaevvNSEKRLFGRYYRVAFYGqav---------------gfFEEEEGKEYIYKEPKLtGLSEISQRLLKLYA 1920 house mouse
Feature 1                    ###                # #                               # #       ##    
2WM9_A        197 DKFGseNVKMIQDSGKVNPKdldskYAYIQVTHVIPFFDEKELQE---RKTEFERSHNIRRFMFEMPFTQTGk-RQGGVE 272  human
XP_002593328  378 DKFGvgNVKMIKESGKVKAKdldpkYAYIQVTYCEPYFDEKELED---RRTDFEKNNSIRRFVFETPFTQSGk-AHGALD 453  Florida lancelet
XP_002154413 1659 SKYG--NVKLIQDSSKVKPEelnpaVNYVQVSFVTPYFDEDEYKS---RITEFERENNVRRFVFETPFTLSGk-AHGALA 1732 green hydra
XP_002120284  848 SKYGseNVRLIQESGKVNTKeldskLAYIQVTYVQPYFDEHEREQ---RTTYFEQQHNVRNFVFETPFTPGGr-ARGDIE 923  Ciona intesti...
NP_609125    1990 EKFGadVVKMIMDSSPVKVDeldakLAYIQVTHVIPFFSKDELDQ---RLNEFEQNHDVDTFMYETPFTKSGa-ARGSVE 2065 fruit fly
XP_002108822  420 KRFNk-EVAIIQDSGQVDTKtldekKIYIQVTFVSPYFEEEELEN---RITEFERSTNLHRFMYETPFTLSGk-THGALS 494  Trichoplax ad...
EFX79894     1828 AKFGteRVKLAMDSNPIEDKdmepqMAYVQITHVVPYFEENDLTD---RVTEYERNHNINRFMYEIPFTTDGr-VRGSPE 1903 common water ...
XP_003246228 1890 DKFGrdNVRIIMDSSTISISdldvkFAYIQITHVVPYHGEKYMEIdndSVSEFERNHDIDSFVFETPFTLGGgqSQSGPR 1969 pea aphid
XP_792492    1747 DKFGseNVQLIRDSNKVNIDtlkpaIAYIQVTFVKPFFDERELAE---RRTIFERSNNIRRFVFEMPYTKKGtaRSGAVE 1823 purple urchin
AAH47713      523 EKFGteNVKIIQDSDKVNAKeldpkYAHIQVTYVKPYFDDKELTE---RKTEFERNHNISRFVFEAPYTLSGk-KQGCIE 598  human
EFN81354     1855 EKFGseNVKMIMDSVPVDVSeldpkIAYIQVTHVTPYFEKPELEV---RQTEFEQNHNVSCFMFETPFTKEGk-ARGSPE 1930 Harpegnathos ...
Q8BZN6       1921 DKFGadNVKIIQDSNKVNPKdldpkYAYIQVTYVTPFFEEKEIED---RKTDFEMHHNINRFVFETPFTLSGk-KHGGVA 1996 house mouse
Feature 1          # #                                    ##  #             # #   #  ###  ####### 
2WM9_A        273 EQCKRRTILTAIHCFPYVKKRIpvMYQHHTDLNPIEVAIDEMSKKVAELRQLCSsaevDMIKLQLKLQGSVSVQVNAGPL 352  human
XP_002593328  454 EQHKRRTILTTSHSFPYVKKRVlvVYHKTQELKPVEVAVDEMQQKTAELRELVTrdppDMKKLQLKLQGSVSVQVNAGPV 533  Florida lancelet
XP_002154413 1733 EQHKRKTILTTSHCFPYVKKRIlvVQQEIYELSPIEVAIDEMRSKVKELNQVISldppDMKKLQLKLGGTVSVQVNAGPL 1812 green hydra
XP_002120284  924 EQWKRKTILTTSHSFPYVKKRIpvMSMRSFELKPIEVALDEMTSKCNELEQLITaervDLKKLQLRLQGSVNVQVNAGPL 1003 Ciona intesti...
NP_609125    2066 EQWKRKTVIKTQYSFPYVLKRIpvKSREIIELSPIEVAIDEMQSKVSELEEIILpp-aDVKKLQLRLQGSVAVTVNAGPL 2144 fruit fly
XP_002108822  495 EQYKRKTVLTTSHFFPYIKKRLlvVQREQFELTPVEVAIDEMQNKISQLYEVIRdp-pDMKKLQLVLQGCVSVQVNAGPM 573  Trichoplax ad...
EFX79894     1904 DQCKKRIILTTQYSFPYIKKRLrvIQREFYDLSPIEVALDEMRLRVKDIAEAVRtvptDLKKLQLRLQGSISVQVNAGPL 1983 common water ...
XP_003246228 1970 EQWKRQTIIKTEYKFPYVKKRLrvCARREIEQCPIQVAIDEMCQRVRELRQTVSaqptDVKKLQLRLQGSVCVQVNAGPL 2049 pea aphid
XP_792492    1824 DQFKRKTILTTSHTFPYITKRIqvVYQQSQEFNPLQVAVEELQVKVKEMNEVLDmenvDMKRLQLLLQGSVSVQVNAGPM 1903 purple urchin
AAH47713      599 EQCKRRTILTTSNSFPYVKKRIpiNCEQQINLKPIDVATDEIKDKTAELQKLCSstdvDMIQLQLKLQGCVSVQVNAGPL 678  human
EFN81354     1931 DQWKRRTILTTQYSFPYVKKRIgiAEKRIVELSPIEVALDEMRQRVQELEDVALigptDVKKLQLRLQGSICVTVNAGPL 2010 Harpegnathos ...
Q8BZN6       1997 EQCKRRTVLTTSHLFPYVKKRIqvISQSSTELNPIEVAIDEMSRKVSELNQLCTteevDMIRLQLKLQGSVSVKVNAGPM 2076 house mouse
Feature 1          #                           #                 ## ##  #            
2WM9_A        353 AYARAFLDDTntkrypdnkvKLLKEVFRQFVEACGQALAVNERLIkeDQLEYQEEMKANYREMAKEL 419  human
XP_002593328  534 AYASTFLDTAnikkyqkiqvEMLKEVFRQFICVCGEALSLNAQLIktDQFEYHEGLKNDYKSMVARL 600  Florida lancelet
XP_002154413 1813 AYAQTFLESTiiknylpkhiEALQITYREFIKVCGQALKLNAILIkpDQAAYQEDLKERYAVLKEKV 1879 green hydra
XP_002120284 1004 AYAKAFLEDSkvqnhaantiELLRGVFRRFVDLCGRALYINEQLItsNQQVYHESLQECYLRTAAEL 1070 Ciona intestinalis
NP_609125    2145 AYAHAFLDAKvvnnfsmdrvGDLKDVFRDFIVVCQKALFLNERIIsaDQKEYHHVLKENYEKLCQAL 2211 fruit fly
XP_002108822  574 AYAKTFLSPKtvhnyarhhvEKLKSVYRLFMNLCGDALELNGKIIkeDQRKYQEQMIHNYDEMIKDL 640  Trichoplax adhaerens
EFX79894     1984 AYASAFLVHNtqnyp-eeqiQQLQELYRDFVHICGAALELNGKLIlpDQREYHEALRSSFRDLVNSL 2049 common water flea
XP_003246228 2050 AYARAFLEPQavlelqadkvQDLKDTFREFISACFDALKLNRMLVstDQIEYQDVMQENFLKMCREL 2116 pea aphid
XP_792492    1904 AYAAAFLGRGreekwnsqqiSDLKKVFRDFVTSCHNSLYVNAQLIksDQYEYHDDLEQKFQSMVHTI 1970 purple urchin
AAH47713      679 AYARAFLNDSqaskyppkkvSELKDMFRKFIQACSIALELNERLIkeDQVEYHEGLKSNFRDMVKEL 745  human
EFN81354     2011 AYASAFLDPAlspqypddkvEELKDVFREFVKICYTALQINSKLItpDQHEYQEVLRENYQKLCQSL 2077 Harpegnathos saltator
Q8BZN6       2077 AYARAFLEETnakkypdnqvKLLKEIFRQFADACGQALDVNERLIkeDQLEYQEELRSHYKDMLSEL 2143 house mouse

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