2WM9,3B13


Conserved Protein Domain Family
DHR2_DOCK

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cd11684: DHR2_DOCK 
Click on image for an interactive view with Cn3D
Dock Homology Region 2, a GEF domain, of Dedicator of Cytokinesis proteins
DOCK proteins comprise a family of atypical guanine nucleotide exchange factors (GEFs) that lack the conventional Dbl homology (DH) domain. As GEFs, they activate the small GTPases Rac and Cdc42 by exchanging bound GDP for free GTP. They are also called the CZH (CED-5, Dock180, and MBC-zizimin homology) family, after the first family members identified. Dock180 was first isolated as a binding partner for the adaptor protein Crk. The Caenorhabditis elegans protein, Ced-5, is essential for cell migration and phagocytosis, while the Drosophila ortholog, Myoblast city (MBC), is necessary for myoblast fusion and dorsal closure. DOCKs are divided into four classes (A-D) based on sequence similarity and domain architecture: class A includes Dock1 (or Dock180), 2 and 5; class B includes Dock3 and 4; class C includes Dock6, 7, and 8; and class D includes Dock9, 10 and 11. All DOCKs contain two homology domains: the DHR-1 (Dock homology region-1), also called CZH1, and DHR-2 (also called CZH2 or Docker). This alignment model represents the DHR-2 domain of DOCK proteins, which contains the catalytic GEF activity for Rac and/or Cdc42.
Statistics
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PSSM-Id: 212566
Aligned: 73 rows
Threshold Bit Score: 186.35
Created: 22-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 43 residues -Click on image for an interactive view with Cn3D
Feature 1:Rac/Cdc42 binding site [polypeptide binding site]
Evidence:
  • Structure:2WM9: Human Dock9 DHR-2 domain binds Cdc42; contacts at 4A.
  • Structure:3B13: Human Dock2 DHR-2 domain binds Rac1 mutant; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2WM9_A          8 ELRKTWLDSMARIHVKn------------------gDLSEAAMCYVHVTAlvaeyltrkgvfrqgctafrvit------- 62   human
Q86I66       1734 DTRICWLQGLADFHRTq------------------eNYVEAAQCYLHMSSlvaeylsligkpiptingsnnfmaink--- 1792 Dictyostelium...
XP_002994083 1262 DLHIMWLLHLCDAHQEm------------------qSWAEAAECAVAVAGvimqalvarndlvwgrdnlealrri----- 1318 Selaginella m...
EFA78130      396 IIRLDWLSALSSLHVEq------------------eNYFEAAICQIRIALlihtyleqhkllpc---------------- 441  Polysphondyli...
XP_002681330 1752 ELSVTWYHNLAQEHIKh------------------eRYIEAAECYVYIAGvvfeylklrrdkavwggqygseqkkvnels 1813 Naegleria gru...
Q55EI2       1731 NLRLTWLENLSKIHSDn------------------eNFDEASQCLVHCAYlisryliqtnkfndilesdflsicpni--- 1789 Dictyostelium...
Q54CA8       1694 EMKADLYYNLSNTFIEspdlritllksfkeflkqqkSMEEAAQVSIIAAAlvsgylkllnrfpkellatdfttvspnv-- 1771 Dictyostelium...
XP_003056877 1923 AAHCKALRSLSARLENg------------------qHWVEAAEAAATAASvamqalaaaqatavgapcvwndvdaeklrg 1984 Micromonas pu...
CCA19956     1274 DEKLFWLDALVRLHTAr------------------kNFAEAAYCKCFAAEyclqsaqv---------------------- 1313 Albugo laibac...
XP_001417842 1491 AAHVKVLHSLSNRLAAn------------------eHWVEAAEASTAAGIiamqafsiaaptlcvwfdhdvqslrds--- 1549 Ostreococcus ...
Feature 1                                                                                         
2WM9_A         63 -----------------------pnideeasmmedvgmqdvhfnedVLMELLEQCADGLWka------------------ 101  human
Q86I66       1793 --------------------nsleeshtfiereedgaddnqsftldFFLKLVQEAILLLKes------------------ 1834 Dictyostelium...
XP_002994083 1319 ---------------------cpmlatsveasaaevegygaskltvDSAVKYLQLGNKLFaq------------------ 1359 Selaginella m...
EFA78130      442 ---------------------------------pldlslidrinpnLKEIVVEEDEGVCTsplfsvegmrssillainqm 488  Polysphondyli...
XP_002681330 1814 qyllnispylrsenfselralfqrkpsentegpvgpefeshyfnrdGMVQLIYSAIHFCKed------------------ 1875 Naegleria gru...
Q55EI2       1790 --------------------kselllptfdqkdsgalfqsniwslpYVVELLEKAIEYLMmg------------------ 1831 Dictyostelium...
Q54CA8       1772 ------------------aneltlpdlslledvegeickldhftdtGFINLLKDAIQIQKs------------------- 1814 Dictyostelium...
XP_003056877 1985 vc-------------gslsrdglafpaspaaaatssrcgveeiseeKVLAHIAESVRLFVrg------------------ 2033 Micromonas pu...
CCA19956     1314 ---------------------------------------qtglaknRYASELEKAMEYVEra------------------ 1336 Albugo laibac...
XP_001417842 1550 -------------------ffalpdgaspvpavagircgteeiseaQILTHLSRAVDLFTkg------------------ 1592 Ostreococcus ...
Feature 1                                                                                # #      
2WM9_A        102 ---eRYELIADIYKLIIPIyekrRDFERLAHLYDTLHRAYSkvtevmh----------------sgrrllGTYFRVAFFG 162  human
Q86I66       1835 ---eYFEIANLVYKLLLPVheehLNYQELARCHGDLQDIFKrivectn----------------tqsrmlGSYYRVGLYG 1895 Dictyostelium...
XP_002994083 1360 --aeLFHFCAAIVELVIPVhksrKAYGQLAKCHTSLTAIYEsiveqes---------------splpfidATYYRVGFYG 1422 Selaginella m...
EFA78130      489 rmaeCFEFSILLYKVIIPLhendRDYIRLSEYYKQSHKLYDeiirsne----------------nksrmlGRYYRVGFYG 552  Polysphondyli...
XP_002681330 1876 ---gYYEYMIELHKLLLGLfeieGNFERMKSVHNELSNLYAkiaepkt----------------rsarlfGAYYRIYFVG 1936 Naegleria gru...
Q55EI2       1832 ---nRYELAIEIHSLISKIhktkKDYKSLSTSLSNCQKVCLelgekn-----------------ketriyARFYRVGFFG 1891 Dictyostelium...
Q54CA8       1815 ---gYFESAAETYRLLLPTyqhqKDWTKQRDAYQELVLLCNqiisenv----------------vnqrifSNYYRVAFYC 1875 Dictyostelium...
XP_003056877 2034 ---gHLEAATRAAKVALPAwerrRAFGDLARAHTGIAAVYRslhqlppagasgsgsfgilppplgpppppATFYRVKLVG 2110 Micromonas pu...
CCA19956     1337 ---gWDSKKIEIWENMLRHa---RKCATCSEQFGHISQILEhvplkptl--------------cdiqqldFCLYRVSVLL 1396 Albugo laibac...
XP_001417842 1593 ---gHLEAAIRVNETAQIAwethRQFDSLSESHAMMAELFRrldatsgvgdpkr---yewditskpppesATFWRIRLLG 1666 Ostreococcus ...
Feature 1                             #      #### ##                   ###                      ##
2WM9_A        163 qgf---fedEDGKEYIYKEPKl----tPLSEISQRLLKLYSdkfgs-envkMIQDSGKVNPKdld------skYAYIQVT 228  human
Q86I66       1896 krf----eeMNGKEFIYKEPKi----tRLVEIKDRLKSLYSkklsvpedsiVIIEGSTVDISsieq----daaKCYLQIT 1963 Dictyostelium...
XP_002994083 1423 eqf----gkLNRREYVYREAKd----vRLGDIMEKLGHIYElvlgadqtlhIIPDSRQVKADele------sgVCYLQIT 1488 Selaginella m...
EFA78130      553 krf----deLNGMEFVYKEPKl----tHLFALTERLKSFYReklg--eqifIFPDSSRVTKSnle------pdKLYIQIT 616  Polysphondyli...
XP_002681330 1937 qlf---penVREKEFVYKMPKt----tRLNSLMTYLKDHFRfgk----elkIIGDSQIITDAmkq------edEAYVQIT 1999 Naegleria gru...
Q55EI2       1892 kkfs--deqMDGKEYIYKKPHkcnisvLQNQIKNNLQEKFGqde-----eiIVLSNAKVDKNsld------peKVHIQIV 1958 Dictyostelium...
Q54CA8       1876 qdl---ipdLHGKEFVYKENNy----vRLSDLSERLKKQYCdkfge-dkfhLLPNNKPVDLSsld------vkHIYIQII 1941 Dictyostelium...
XP_003056877 2111 daw---gieDRGRTWVHREPRd----rTLGDMTRRLQKSLTa---------GLPEGTPVTPLpaggd--apagAACVQIQ 2172 Micromonas pu...
CCA19956     1397 dsrlgcshpLGLAEYIYKRNIf----tSLGEFVNEIKAILKek-------tSVSTSIELVPEgkslpeipkpeTIYFRTN 1465 Albugo laibac...
XP_001417842 1667 dvw----dkMQGLEWVYRESQd----rTLGDMNKKIISQLSpylpsgtrvtAMSTNAESVIEe---------gCAGVQIT 1729 Ostreococcus ...
Feature 1         #                                        ####                  ##  # #          
2WM9_A        229 HVIPFFdekelqer-------------ktefersHNIRRFMFEMPFTQtgk---------rqgGVEEQCKRRTILTAIHC 286  human
Q86I66       1964 SVVPYFteeelvgr-------------rtpfdriVHLNRFIFETPFIEsgag--------ranSIAEQYKRKTILKTSNY 2022 Dictyostelium...
XP_002994083 1489 SVDPIFegedlesrker------iaarpsacscaRVFDHFLFDTPFTKngk---------sqgGLEDQWKRRTVVQTHGS 1553 Selaginella m...
EFA78130      617 SLKPYFkdsrtn-----------------yfdrkTLLNQFVFITPFTLsgk---------sqgSITEQFHRKTILTIECV 670  Polysphondyli...
XP_002681330 2000 SVKPYYdptdavayei--------snsdryfnenVNISKFIFETPFTMagkk--------shgSITEQCKRKTIIKTKIT 2063 Naegleria gru...
Q55EI2       1959 SVDPYIvdpqhqssaat------vdvalsqfdqyFNISQFISEVPFSTegka--------iqdDMSKQQKKKTIFSVELA 2024 Dictyostelium...
Q54CA8       1942 SVDPYLlpeelker-------------ttpfqqnTHLNKFIFEIPFTKngkt-------qyseNVTEQWKKKIILTTPNY 2001 Dictyostelium...
XP_003056877 2173 AVEPVYtvhaqsgadgdgdddtgggsggggfpafPTTNAFIYDVPFVSgtldafg--gsgpvaALRTQWRRRTTVNVEGR 2250 Micromonas pu...
CCA19956     1466 VLKPVGky-------------------------vDHCRQFEYATPFTFsgt---------aygNVSDQMKRIIRLTVGNS 1511 Albugo laibac...
XP_001417842 1730 AVQRDLesinqaaig-----------ggvggtgfTRCGRFMFDTPVLFtedgevsqgqgavvaSLRYQGRRRTIITVDGQ 1798 Ostreococcus ...
Feature 1                                   ##  #                                                 
2WM9_A        287 FPYVKKRIpvMYQHHTDLNPIEVAIDEMSKKVAELRQLCSsae------------------------------------- 329  human
Q86I66       2023 FPYTKKRIsvISKQEVILSPIENSIETIDQRTETISNEVRskv------------------------------------- 2065 Dictyostelium...
XP_002994083 1554 FPALVNRLlvIKSESREFSPIENAIGMIEARTATLRNELEeprnse---------------------------------- 1599 Selaginella m...
EFA78130      671 APNMLKRYpvVDYKEIEISPIENSIEAITQRTRLLAMEINqsp------------------------------------- 713  Polysphondyli...
XP_002681330 2064 FPSVLNRSevLSKDHTELTPIENSTEIVEMSIQRLATACSgadqvnasekdegknkqvfrfgrildddfdvdeefatdqt 2143 Naegleria gru...
Q55EI2       2025 FPYVKNRLevVSKREIILSPIENAIELIRGRCIKLKEQLDtnp------------------------------------- 2067 Dictyostelium...
Q54CA8       2002 FPYLKKRLpiVKKEEIELTPIEASIELIQKKVTILKAELNsrp------------------------------------- 2044 Dictyostelium...
XP_003056877 2251 FPGLRARLqvTSEAVTEMSPASSAAEMLRSQARAIAAAADawesttrvaqsgggtaavmg-------------------- 2310 Micromonas pu...
CCA19956     1512 FPYFLTRQtvTDRQEYICCPIENAIVDIAKRNAALQLEIDkern------------------------------------ 1555 Albugo laibac...
XP_001417842 1799 FPSLLPRApiIDTTVEEMNPCQSAIQMLEEQTIALLAAAHarr------------------------------------- 1841 Ostreococcus ...
Feature 1                                               ## ##  ###  ###  ##  #                    
2WM9_A        330 -----------------------------------vdMIKLQLKLQGSVSVQVnaGPLAYARAFLDDTntkry------- 367  human
Q86I66       2066 -----------------------------------pnPKTLQQVLQGTLRLQVniGPQEICRVFLATDptsgayn----- 2105 Dictyostelium...
XP_002994083 1600 -------------------------------gdhlprLQSLQRILQGSVAVQVnsGVLGVCSAFLSGEpatkl------- 1641 Selaginella m...
EFA78130      714 -----------------------------------pnIKTLQGVLQGSVLLQVnaGAIEICRGFLAKSqrasw------- 751  Polysphondyli...
XP_002681330 2144 eatpvtilpvgdnnvtptspsddlvnvekkkqsapidVSQLHLVLTGVVIPSVneGIPHIVNSFLHPDevsky------- 2216 Naegleria gru...
Q55EI2       2068 -----------------------------------prINLLHQILQGSVFPMVneGPLKICEIFLSPKtinnf------- 2105 Dictyostelium...
Q54CA8       2045 -----------------------------------anTKTLQIHLQGCLLLQVnaGPLAICSSFLAEGqyqnh------- 2082 Dictyostelium...
XP_003056877 2311 -----------------gsganaaaddaaaaaaaagsLSALQRSLQGSLSAGVngGVPTICEAFFPPDpkqvtwqddgsg 2373 Micromonas pu...
CCA19956     1556 ---------------------------------gsteSKTLSLILKGSVDPEVhgGIPEVIRSFFGCEsaggdarekmin 1602 Albugo laibac...
XP_001417842 1842 -----------------------------------phAELLQRLLQGSLAAGVngGVPSLIHSFFRTElpsavayhgeam 1886 Ostreococcus ...
Feature 1                                                                                         
2WM9_A            --------------------------------------------------------------------------------      human
Q86I66            --------------------------------------------------------------------------------      Dictyostelium...
XP_002994083      --------------------------------------------------------------------------------      Selaginella m...
EFA78130          --------------------------------------------------------------------------------      Polysphondyli...
XP_002681330      --------------------------------------------------------------------------------      Naegleria gru...
Q55EI2            --------------------------------------------------------------------------------      Dictyostelium...
Q54CA8            --------------------------------------------------------------------------------      Dictyostelium...
XP_003056877 2374 ddgeetrespp--------------------------------------------------------------------- 2384 Micromonas pu...
CCA19956     1603 reanlph------------------------------------------------------------------------- 1609 Albugo laibac...
XP_001417842 1887 reaefltparavevspetptpssrhstprlpmihhkrglsenavpmgagipldtptsasyptpspsakapppspasvaks 1966 Ostreococcus ...
Feature 1                                           #                           ##  #            
2WM9_A        368 --------------------pdnkvKLLKEVFRQFVEACGQALAVNerlik-------edqlEYQEEMKANYREMAKEL 419  human
Q86I66       2106 -------------------ypleqiKKLKKSLSLFLGSCSEALFINkglve------nqssqEFQEEMEQGYIQLTDLM 2159 Dictyostelium ...
XP_002994083 1642 --------------------rsqelQQLIAALLEFMAVCKRAIRIHsrlig-------eedqDFHSQLVNGFQSLTAEL 1693 Selaginella mo...
EFA78130      752 --------------------ptekvNQLADGCTEFLEQCKNALLINkrliq-------mdqiGFHHELEIGYRKLQFKM 803  Polysphondyliu...
XP_002681330 2217 --------------------epqfvKNLKKACVEFLRSCYRAILISneycs-------daqrPLHNKFEEGYVTLISVF 2268 Naegleria grub...
Q55EI2       2106 --------------------nadhvDQLKKAMEKFIIYCGFTLRLSrsiis-------vqlqEFQNMIEEQYKTLKGQI 2157 Dictyostelium ...
Q54CA8       2083 --------------------naehiQKLSEVIKEFSKTLDFGLKFNasltk-------edgaELQKQLDSGYDNFRKKL 2134 Dictyostelium ...
XP_003056877 2385 ---rqvssppaspftlklamsdeerEGLLEALEHFSSTCSRAVEVHggavrataaegrssmeQMQGMFVRCLSEIKREI 2460 Micromonas pus...
CCA19956     1610 -------lldstgncmdsdlsiikqLELADIILCFLQKCQQCLQISrktcrks---asvtsaSFQTPLSPSFQRIHENM 1678 Albugo laibach...
XP_001417842 1967 vlitpistttlspstpapplsrsdsLGLVQALWKLYRACVKVFETHqk-------------lEQAEHLERLFESAIQDL 2032 Ostreococcus l...

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