Conserved Protein Domain Family
LamB_YcsF_like_2

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cd11664: LamB_YcsF_like_2 
uncharacterized proteins similar to the Aspergillus nidulans lactam utilization protein LamB
This bacterial subfamily of the LamB/YbgL family, contains many well conserved uncharacterized proteins. Although their molecular function is unknown, those proteins show high sequence similarity to the Aspergillus nidulans lactam utilization protein LamB, which might be required for conversion of exogenous 2-pyrrolidinone to endogenous GABA.
Statistics
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PSSM-Id: 212129
Aligned: 6 rows
Threshold Bit Score: 421.088
Created: 18-Jan-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative active
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to Pseudomonas Aeruginosa hypothetical protein Pa4511

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #                                                       #          #       
Q9I626         4 VDLNSDMGEGFGPWtigdGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGVAIGAHPGFRDLVGFGRRHIaapA 83  Pseudomonas aer...
ZP_08634525    6 VDINCDLGESFGRWragdAEDADLMRLISSANIATGFHAGDPNLMDQTVRLAVDHGVGIGAHPGYRDLHGFGRRRIagtP 85  Acidiphilium sp...
Q63NV1         6 VDLNSDMGEGFGPWkigdGVDEEIMPLISSANIATGFHAGDPNIIARTVQLAKNAGVGVGAHPGFRDLVGFGRRDIgetP 85  Burkholderia ps...
YP_004607150   5 IDLNSDMGECFGPWiigdGVDDEIMKLISSCNIAAGFHASDPNIMRHSVQNALEQGVQIGVHPGFRDLVGFGRRHIvanP 84  Helicobacter bi...
EFK44297       5 IDISSDMGESFGAWtlgdIRDIDIMPYISSANIATGFHAGDPGIMHRTIISARDSGVSVGAHPGYRDLAGFGRRHIhctA 84  Escherichia col...
EAR51717       1 MDLNCDMGEGFGHWsygdAPDEELMEIISSANVATGFHAGDPMTMDRVAALAAEHDVGLGAHPAYRDMQGFGRRAInatS 80  Oceanicola gran...
Feature 1                                    # ##   #                                            
Q9I626        84 IELVNDMLYQLGALREFArlqglSLQHVKPHGALYMHLArDEVAARLFVETLQRlepeLLLYCMpgsATWRIGRelGQPL 163 Pseudomonas aer...
ZP_08634525   86 AELVNDIVYQVGALREFArrygaTLQHVKPHGALYMEMAvNSDLSQSFVQFMRAvapdAFIFCMagsETERVGReaGQPV 165 Acidiphilium sp...
Q63NV1        86 QALVNDIVYQLGALREFArfhgvSVQHVKPHGALYMRAArDEALSRLLVETLQQldpaLRLYCMeasVTYRIARelGQPV 165 Burkholderia ps...
YP_004607150  85 TELTNDCLYQLGALREFVhflggKLHHFKPHGSLYIHASkDRTFSEELISTLHKidphLPLYCMqgtITHEVAKelKHPF 164 Helicobacter bi...
EFK44297      85 EEITNDMIYQLGALREFAtlhnvPVNHVKPHGALYMHLAhDRDAAKHFVSTLHSyapeLRIYCMygsAIWKEATqiGHPV 164 Escherichia col...
EAR51717      81 EELVADILYQVGALEMFArrhgiALSHIKPHGALYMTAAkDRDLSEKLVDALQVvapdTPLYCMgvsETWQVTQakGHPA 160 Oceanicola gran...
Feature 1            #  #       #  #                                         #                 
Q9I626       164 VREFYADRDYDRsGSIVFTRRVAALDPQQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVASTRARL 241 Pseudomonas aerug...
ZP_08634525  166 VREFYADRDYEEsGSIVFTRQQVRLDPEAIAAKVVRACKEGRVRTVTGRDINIEFESICFHSDTPGCLELASRMRDAL 243 Acidiphilium sp. PM
Q63NV1       166 VREFYADRDYGRnGSIVFTRRAGRLDPRQVADKVLRACVDGRVATVDGEDIDIDFDSICLHSDTPGALALARATRDAL 243 Burkholderia pseu...
YP_004607150 165 VREFYGDRDYGDdGQLVMVRRARAYTPEEVANKVLQACKEGTVQSVTGKIIPVDFDSVCIHSDTPGALSLIKATRTLL 242 Helicobacter bizz...
EFK44297     165 ICEFYADRDYDQsGSIVFIRRTEPLNPDDVAKKVLRACLEGKVRTVEDQDIDIHFSSVCVHSDTPGALSLLIAINKAL 242 Escherichia coli ...
EAR51717     161 RREFYADREYDAtGAIVFARKVPAFDPAALADKCVRACVEGKVRCTEGHDVDVAFESICFHSDTPGAARIGAAIRAAL 238 Oceanicola granul...

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