Conserved Protein Domain Family
SYLF

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cd11524: SYLF 
The SYLF domain (also called DUF500), a novel lipid-binding module
The SYLF domain is named after SH3YL1, Ysc84p/Lsb4p, Lsb3p, and plant FYVE, which are proteins that contain it. It is also called DUF500 and is highly conserved from bacteria to mammals. Some members, such as SH3YL1, Ysc84p, and Lsb3p, which represent the best characterized members of the family, also contain an SH3 domain, while family members from plants and stramenopiles also contain a FYVE zinc finger domain. Other members only contain a stand-alone SYLF domain. The SYLF domain of SH3YL1 binds phosphoinositides with high affinity, while the N-terminal SYLF domains of both Ysc84p and Lsb3p have been shown to bind and bundle actin filaments, as well as bind liposomes with high affinity.
Statistics
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PSSM-Id: 211400
Aligned: 109 rows
Threshold Bit Score: 79.1717
Created: 5-Apr-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative amphipathic alpha helix
Evidence:
  • Comment:This predicted N-terminal amphipathic alpha helix is necessary, but not adequate, for lipid binding.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ##############                                                                  
Q96HL8        11 SEAKKAAKILREFTEitsrn----------gpdkiIPAHVIAKAKGLAIL-SVIKAGFLVTARGGSGIVVarlpdgkWSA 79  human
YP_001466938  27 QKLKNAINILNAFGTrn-----------------lKPNTKFTGIKAIAIIpDVTKAGAIITGSKGRGVFIaknddgeWSS 89  Campylobacter c...
ZP_05362788   26 QKVRTSFDILNDLGSrk-----------------lLNLKDTSEIRGIMVIpDVVSGGLVVTTHTGDGIFVgrndeneWSS 88  Campylobacter s...
YP_001406113  26 QELYAASNVISSFAHdnn---------------fsIPADKVLNAKAVAILtDVKRSAAVVSTQYGDGVFSvkdengnWSA 90  Campylobacter h...
ZP_05625822   24 QEVIAATNVVRSFVAann---------------fgTDERYLTSAKAVAILtDVKRLAAGASLQYGDGIFSvkgengeWSS 88  Campylobacter g...
Q0I007         6 SLIVASTCLIASFMApaaqaddsytealnnfhqakETRKFFDTAYGYALFpTVGKGGIGIGAAYGKGRVFq-----aGQY 80  Shewanella sp. ...
ZP_08308868   17 MLSSTSALAQDSDTQkaldl----------fyqspQTQPFFKSAYGYAVFpSVGKGGFWVGGAYGNGVVFk-----aNQA 81  Photobacterium ...
ZP_01222072   26 KEDYETQAVLKQFQQa------------------kQTQPFFLSSYGYAVFpSVGKGGFWVGGAYGTGSVYq-----aSEM 82  Photobacterium ...
ZP_09096001   23 AFADSYTNTINVFKRa------------------eAVQPFFDSCYGYAVFpIVGKAGIFVGGAYGQGRVYq-----dDLI 79  Desulfobacter p...
YP_002513352  21 AWADAYEDTLQVFREa------------------iESKHFFDNAYGYAVFpTIGRGGIGIGGAHGRGRVYe-----rGNH 77  Thioalkalivibri...
Feature 1                                                                                        
Q96HL8        80 PSAIGIAGLGGGFEIGiEVSDLVIILnydRAVEAFAKgGNLTLGGNLTVAVGPlGRNLEGnvalrssaa----------- 148 human
YP_001466938  90 PFFVNYTSGSIGLQLGySSADMIILFknsEAYASLFN-AKDTISLKAEATGGVgNEVAIAsdlpeisaf----------- 157 Campylobacter c...
ZP_05362788   89 PIFINFKGGGIGLQGGyKSTDLVVLFksrRSYAGLIN-GKGQIDLSADAVVLAaGEKAGVmsdlpeisa----------- 156 Campylobacter s...
YP_001406113  91 PLFIKYRGFGVGVQAGyETSDIVMLFqttKSYQDIFN-GTDTLELNVAGSVVEgKRGGAAtdlpdisaw----------- 158 Campylobacter h...
ZP_05625822   89 PIFIKYKGYGVGLQAGyETSDIVMIFhttKSYQDIFT-GTDTLEINVGAAAGGvGRRTGRatdlpdisa----------- 156 Campylobacter g...
Q0I007        81 MGDSSLTQLSIGFQLGgQAYSEIIFFkdaKSYNEFTS-GSFEFDAQASAVAINmGANAKAgt------------------ 141 Shewanella sp. ...
ZP_08308868   82 TGFAKLFQVSIGLQFGgQAYSEILFFqdkRAYDNFVS-GSFELDAQASAVALDeGASAKAgtagagagsngeyatrsyin 160 Photobacterium ...
ZP_01222072   83 TGFAKLYQVSFGLQFGgQSYSEIIFFqdkRAYERFIG-GSFELDAQASAVALTeGAQAKAgt------------------ 143 Photobacterium ...
ZP_09096001   80 TGTATITKITLGFQLGgQAFSEIIFFqdkRAYDEFTD-GSYEFDASVSAVVVTaGAQAKAgs------------------ 140 Desulfobacter p...
YP_002513352  78 IGDTRMTQVTVGFQLGgQAYSQIIFFedqRALREFTG-GNFEFGAQASAVAITaGASAGVgt------------------ 138 Thioalkalivibri...
Feature 1                                                                                      
Q96HL8       149 --vftycksrGLFAGVSLEGScl--ieRKETNRKFYCqdiraydilfg-------------dtprpaqaedLYEILDS 209 human
YP_001466938 158 --veergktsGAFVGVSLDVArl--kiNAQDTNDYYErmydfediynn-------------spkaskytikFKEIISK 218 Campylobacter con...
ZP_05362788  157 -watlrgksrGLFAGVSINTSli--vvDKEATYDYYDrmydmediynn-------------spkdsrytktLKEVLNK 218 Campylobacter sho...
YP_001406113 159 --ivspgevtGVYLGVSLDIGri--tiDDQLTNDFYDriydyedilnd-------------sprdnkyskiFKSTLKK 219 Campylobacter hom...
ZP_05625822  157 -wmvspgeqtGVYLGVSIDNGri--tiDDQLTNDFYEriydyedilnd-------------sprankyakrWKEVMRK 218 Campylobacter gra...
Q0I007       142 ---------tGNSAGAGQAGG------NQSATAAYINgmavftv---------------------akgglmFEAALAG 183 Shewanella sp. MR-7
ZP_08308868  161 gvaiftkakgGAMIEASLAGQkftfepMTEATRNVKGydkmvpqglqkpakeaktikptetikapaeenavVVETLER 238 Photobacterium le...
ZP_01222072  144 ---------gGVGAGAGDNYVdssyinGVAVFTSAKGgmmieas---------------------iagqkfSYEVLTP 191 Photobacterium pr...
ZP_09096001  141 ---------dGGSAGASAGPAt-----GIQANTGYYKgm------------------------------avFIHAKAG 174 Desulfobacter pos...
YP_002513352 139 ---------tGATAGASGTQH------DARAVANYYRg--------------------------------mAVFTVAK 169 Thioalkalivibrio ...

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