Conserved Protein Domain Family
SLC5sbd_SMCT

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cd11505: SLC5sbd_SMCT 
Na(+)/monocarboxylate cotransporters SMCT1 and 2 and related proteins; solute-binding domain
SMCT1 is a high-affinity transporter of various monocarboxylates including lactate and pyruvate, short-chain fatty acids, ketone bodies, nicotinate and its structural analogs, pyroglutamate, benzoate and its derivatives, and iodide. Human SMCT1 (hSMCT1, also called AIT) is encoded by the tumor suppressor gene SLC5A8. SMCT1 is expressed in the colon, small intestine, kidney, thyroid gland, retina, and brain. SMCT1 may contribute to the intestinal/colonic and oral absorption of monocarboxylate drugs. It also mediates iodide transport from thyrocyte into the colloid lumen in thyroid gland and, through transporting L-lactate and ketone bodies, helps maintain the energy status and the function of neurons. SMCT2 is a low-affinity transporter for short-chain fatty acids, lactate, pyruvate, and nicotinate. hSMCT2 is encoded by the SLC5A12 gene. SMCT2 is expressed in the kidney, small intestine, skeletal muscle, and retina. In the kidney, SMCT2 may initiate lactate absorption in the early parts of the tubule, SMCT1 in the latter parts of the tubule. In the retina, SMCT1 and SMCT2 may play a differential role in monocarboxylate transport in a cell type-specific manner. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271395
Aligned: 3 rows
Threshold Bit Score: 928.141
Created: 8-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1: putative glycosylation site [posttranslational modification site], 1 residue position
Conserved feature residue pattern:NClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
Q8N695      7 IGTFVVWDYVVFAGMLVISAAIGIYYAFaggGQQTSKDFLMGGRrMTAVPVALSLTASFMSAVTVLGTPSEVYRFGAIFS 86  human
NP_848593   3 VKNFAVWDYVVFAALFFISSGIGVFFAIkerKKATSREFLVGGRqMSFGPVGLSLTASFMSAVTVLGTPSEVYRFGASFL 82  human
Q7SYH5      7 IGSFTVWDYLVFALMLLISAVIGIYYAFaggGQKTSKDFLMGGRsMTAVPVALSLTASFMSAVTVLGTPAEVYRFGAMFI 86  African clawed frog
Feature 1                                                                                     
Q8N695     87 IFAFTYFFVVVISAEVFLPVFYKLGITSTYEYLELRFNKCVRLCGTVLFIVQTILYTGIVIYAPALALNQVTGFDLWGAV 166 human
NP_848593  83 VFFIAYLFVILLTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWGSV 162 human
Q7SYH5     87 IFAFSYTIVVIISSEVFLPVFYRLGITSTYEYLELRFNKFVRLLGTILFIIQTVLYTGIVIYAPALALNQVTGFDLWGAV 166 African clawed frog
Feature 1                                                             #                       
Q8N695    167 VATGVVCTFYCTLGGLKAVIWTDVFQVGIMVAGFASVIIQAVVMqGGISTILNDAYDGGRLNFWNFNPNPLQRHTFWTII 246 human
NP_848593 163 FATGIVCTFYCTLGGLKAVVWTDAFQMVVMIVGFLTVLIQGSTHaGGFHNVLEQSTNGSRLHIFDFDVDPLRRHTFWTIT 242 human
Q7SYH5    167 VATGVVCTFYCTMGGLKAVVWTDVFQVGIMVAGFTSVIIRAVVVqGGIGPILNDSYYGDRLNFWDFDPNPLKRHTFWTIV 246 African clawed frog
Feature 1                                                                                     
Q8N695    247 IGGTFTWTSIYGVNQSQVQRYISCKSrfqAKLSLYINLVGLWAILTCSVFCGLALYSRYHDCDPWTAKKVSAPDQLMPYL 326 human
NP_848593 243 VGGTFTWLGIYGVNQSTIQRCISCKTekhAKLALYFNLLGLWIILVCAVFSGLIMYSHFKDCDPWTSGIISAPDQLMPYF 322 human
Q7SYH5    247 VGGTFTWTGIYGVNQAQVQRYIACKTrfqAKMSLYVNLIGLWAILACAVLSGLAMYSIYKDCDPWTAKFVSAPDQLMPYL 326 African clawed frog
Feature 1                                                                                     
Q8N695    327 VLDILqdYPGLPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPYfRSLSERslSWISQGMSVVYGALCIGMAALASLM 406 human
NP_848593 323 VMEIFatMPGLPGLFVACAFSGTLSTVASSINALATVTFEDFVKSCfPHLSDKlsTWISKGLCLLFGVMCTSMAVAASVM 402 human
Q7SYH5    327 ALDILrdYPGLPGLFVSCAYSGTLSTVSSSINALAAVTVEDLIKPYiRSLSEKkmSWISKGTSLLYGAICIGMAGIASLM 406 African clawed frog
Feature 1                                                                                     
Q8N695    407 GALLQAALSVFGMVGGPLMGLFALGILVPFaNSIGALVGLMAGFAISLWVGIGAQIYPPlPERTLPLHLDIQGCNSTYNe 486 human
NP_848593 403 GGVVQASLSIHGMCGGPMLGLFSLGIVFPFvNWKGALGGLLTGITLSFWVAIGAFIYPApASKTWPLPLSTDQCIKSNVt 482 human
Q7SYH5    407 GGLLQAALSIFGMVGGPLLGLFSLGILFPFvNSLGAVIGLLSGFAISLWVGIGSQIYAPsPSSSLPKPLSLEGCNFTSIe 486 African clawed frog
Feature 1                                                               
Q8N695    487 tnlmtttempfttsvfqiynvqrtpLMDNWYSLSYLYFSTVGTLVTLLVGILVSLSTG 544 human
NP_848593 483 atgppv-------------lssrpgIADTWYSISYLYYSAVGCLGCIVAGVIISLITG 527 human
Q7SYH5    487 snwtstvmpmmttlipetqvssrpeLADSWYSLSYLYFSTIGTIVAVLVGVIVSLLSG 544 African clawed frog

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