Conserved Protein Domain Family
SLC5sbd_NIS-like_u2

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cd11494: SLC5sbd_NIS-like_u2 
uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain
Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters, SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271385
Aligned: 26 rows
Threshold Bit Score: 470.543
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                       #  #                             
ZP_01885423    4 IDWAVLVLTLVVIVVYGIYKsrGAQNIQGYLLGNQsLPWYHVCLSVMATQASAITFLSAPGLAYSS---GMSFVQFYFGL 80  Pedobacter sp. ...
YP_001087158   5 IDVCIIIGYLLLMLVIGYYSgkDNKNQEDYFLAGRsMPWIPIALSVAATMISANGFIGGPGWAYVD---GMYPVMVNITV 81  Clostridium dif...
NP_936159      5 SSFVVIALYVAITILISHLVnkRYSNGGDFSTGGKqFGWFTAGVSILATYISAMTFVGMPGWVYSS---GMEAMSIHLNY 81  Vibrio vulnific...
ADO83355       5 IDSAIIIIYILGLLVIGWFLgkENKDQEDYFLAGRsMPWLPIGLSVAATMISANSFVGAPGWAYNA---GIAPFMVNIGV 81  Ilyobacter poly...
EFK12349       7 IDWIVLSIYIVAIIGMSAFIgrRQKSQEDYYLGGRaMPSWQIGLSIIATQVSAISLVGAPAFIALKgngGLLWLQYEFAI 86  delta proteobac...
AEN74276       5 LDYLIIGGYFLGLVLFSYVIgrRYAGRADYFLGGRrMPAWAIGASMMATQAGVISMISAPAFVALRpggGLQWLQYEFAV 84  Rhodothermus ma...
AEH01430       4 IDYIIIILYLIGFLGIGYFFk-ENKNSKDYFLGGQsMGWFPLSLSTMATQLSAISFISAPAFVGLKdggGLQWLTYEFGV 82  Lacinutrix sp. ...
EED36680       8 LDWWVIGVYLVGLIGFAVWLsrSQFSREDYYVGGRhVGAWPVALSIMATQCSTNSILGAPAFVAFAaggGLIWLQYELAV 87  gamma proteobac...
AEE21390       4 LDFLVVALYLVALLVMGFMLr-EQTNKSDYFLGGKsLGWKPLALSVMATQLSAISFISAPAFVGLReggGMQWLSYELGV 82  Glaciecola sp. ...
AEF05410       4 IDFTVVAIYLMGLLIMGFVFr-KQVSKKDYFLANRqLGWKPLSLSIMATQLSAVSFISAPAFVGLRedgGLIWLSYELAL 82  Alteromonas sp....
Feature 1                                                                                        
ZP_01885423   81 PLAMIVLCITFVPIFHRLKVYTAYEYLEQRFdLNTRALTAFLFLVQRGLSTGITIYAPSIILSTILNINTTYTTLFMGSL 160 Pedobacter sp. ...
YP_001087158  82 PLAIFFALSITTPVIYKLKITSIYEYMGLRLgNYSRGLTIIQFFINSLIQVSSMVYIPVLIIQMITGWSLYALVPIVVLV 161 Clostridium dif...
NP_936159     82 PIVIFFTVIFFVPVFYKLGLTSIYEYLEHRFgVYARTINSIVFIVVQCISAGVILYAVALILVQVLPISISEAIIYISIF 161 Vibrio vulnific...
ADO83355      82 PLAIFFVVYTTIPVLYHLKLTSIYEYVEKRLgISSRMLTVIGFLVNSIIQISSMVFVPALILQRITGWDLKLIVPIVVLS 161 Ilyobacter poly...
EFK12349      87 PLAMMGIMLVMVPLYHRTRAITIYEYLEKRFgRSTRMSISAVFLVSRGLGSGVALLATAIVTAVCLGWPLWETILLIGAI 166 delta proteobac...
AEN74276      85 PLAMILVMAVLARTFHRANVITVYEYLERRFgAGTRLAFSAIFQISRGLATGVSIYAAAILLSTILGTSLAVAILLVGGI 164 Rhodothermus ma...
AEH01430      83 PLAMAFLLIAIIPTLYKSGIVSVYEFLERRFdASSRLLISFVFQISRSVATGVMVYTMALILQATIGIEFWISILIIGVI 162 Lacinutrix sp. ...
EED36680      88 PLAMLFLILLVMPMFRHLQLVSVYGYLEQRFdLKTRLTLSALFLFVRAFATAVTVYSIALVIDLITGVGFFWSVVLLGAF 167 gamma proteobac...
AEE21390      83 PLAMLLLLATILPKLYRAGIVSIYDYLEVRFgRSTRVLISIVFQFSRAFATGIMIYAVSLILQGTMGIEAWQAILLTGVI 162 Glaciecola sp. ...
AEF05410      83 PLAMLALLYFILPTLYRSGVVSVYDFLEQRFgRSSRVLISVVFQISRSFATAIMIYAISIILQSTMGLAFWQSVLLIGVI 162 Alteromonas sp....
Feature 1                                                                                        
ZP_01885423  161 VIFYTVYGGTKAVSYTQMLQMSIIFCGLFAAGIMVVHLlpaeigFTKAISIAGKMGRTNAIDFtfdln------nqytVW 234 Pedobacter sp. ...
YP_001087158 162 SIIYTLLGGIKAVIWTDSIQMIVVISAVFIVIIVALKGmn--lsFFDTLQIAQQSGKLNTFDFsrdis------vtntFW 233 Clostridium dif...
NP_936159    162 TACYTYAGGISTVIWTDMLQSAVLIAGCIAIFAILVTE------INSADYLSRDHLNIINLDFdlgv--------dttLW 227 Vibrio vulnific...
ADO83355     162 SIIYTLLGGIKAVIWTDAVQMVIMWCGLIFSIGLILKGig--mgFFETIAVAKESGKLAALDFsldis------ktnaFW 233 Ilyobacter poly...
EFK12349     167 SIIYTTFGGIVADIYSDILQLIILWAGSLLAIVILFGMl----dSEALSLLKSEQQRLRVFDFsatglg---dgktfgFW 239 delta proteobac...
AEN74276     165 SLLYTTMGGIAADVWSDVVQLFVLWIGIFIVLGYVIHYg----gGWENLLPLIPDERVHALNWahglgd----gatfgFW 236 Rhodothermus ma...
AEH01430     163 TMIYSFQGGMKAVIWGDVIQMCILFFGIVICLFYGLSEl----gGYDNFINLVDKDRLTAVDFskwgfnnadkndefgFW 238 Lacinutrix sp. ...
EED36680     168 TVVYDVFGGIRGVIYSDVIQLLILVVVLAAILGSLIGDs----gGLMAMLDAVPDERRQTLDFahhglg---dgetfaFW 240 gamma proteobac...
AEE21390     163 TVLYSLQGGMKAVVYGDAIQMVIIILGTVACIGYGLYYl----gGVDAFVANVDTDRLQAVKFdsfgfs----gdgfgFW 234 Glaciecola sp. ...
AEF05410     163 TLIYSLQGGMKAVVYGDAVQMVLIVAGALVCLGFGLYHi----gGWTSFLEQVQPERLSTLNTssygfd----gegfgLL 234 Alteromonas sp....
Feature 1                                                                                        
ZP_01885423  235 SGLIGGFFLQLSYFGTDQSQVGRYLSGASVSQSRLGLLMNGMVKIPMQFLILLIGVLVFTFYQYNKPPiffnsfelnkle 314 Pedobacter sp. ...
YP_001087158 234 ATLIGGTVMWIRYFCFDQSQVQRVLTSKSLKCAKNSFVVSAFVMNLVYYFMLLVGVILFVFYGGRSFEts---------- 303 Clostridium dif...
NP_936159    228 AGVVAVSFLHLSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFVYLFFAVLGVLLSVFYQDQSFEns---------- 297 Vibrio vulnific...
ADO83355     234 ASLFGGTIMWIRYFGFDQGQVQRILTAKSIRGVKNSFMVSAFIMNILYFLFLTIGILLFVFYKGKEFTss---------- 303 Ilyobacter poly...
EFK12349     240 PMLIGGFFLYLSYYGCDQSQAQRLLTTATPGEAQKALLMNGVLRFLLVLTYCAFGVLLIPFLLSHPEFahrlqg------ 313 delta proteobac...
AEN74276     237 PMVLGGFFLYSSYYGCDQSQIQRVLSTPSIETARRALFINGIGRFPLVLSYILVGFFFAGFLKAVPEFaalvpp------ 310 Rhodothermus ma...
AEH01430     239 PMVIGGFFLYASYYGTDQTQSQRLLSAKGLPTIKKLLLANGLFRFPITLTYCIMGLVLGTLILQDASFqellnsvyqsn- 317 Lacinutrix sp. ...
EED36680     241 PMLIGGFFLYVSYYGCDQSQVQRTLSTASIDETNKALFLNGLLRFPLVLLYCLVGVGIAVFAVQETSFidslptvd---- 316 gamma proteobac...
AEE21390     235 PMIFGGVVLYASYYGCDQTQAQRALSAKDPDNLRYMILANGVIRFPITILYCFSGLIVGTLAMTEPSFmakipt------ 308 Glaciecola sp. ...
AEF05410     235 PMIFGGIVLYASYYGCDQSEAQRSLSAKSLGDLKKIIMAASFLRFPITLIYCFAGLIIGTLALTTPEFlaqipe------ 308 Alteromonas sp....
Feature 1                                                                                        
ZP_01885423  315 kssyagelkeiqadydlafaqkqqtvmqmnkaldrddqqaigqqrkalqqadekeksirqqatdlmlkndknanvkdnny 394 Pedobacter sp. ...
YP_001087158 304 ------------------------------------------------------------------------------ne 305 Clostridium dif...
NP_936159    298 ------------------------------------------------------------------------------ne 299 Vibrio vulnific...
ADO83355     304 ------------------------------------------------------------------------------nd 305 Ilyobacter poly...
EFK12349     314 ---------------------------------------------------------------------------qqpdf 318 delta proteobac...
AEN74276     311 ---------------------------------------------------------------------------ehpdy 315 Rhodothermus ma...
AEH01430     318 ---------------------------------------------------------------------itslegkkadl 328 Lacinutrix sp. ...
EED36680     317 -------------------------------------------------------------------------gtpeynl 323 gamma proteobac...
AEE21390     309 ---------------------------------------------------------------------------dnpdw 313 Glaciecola sp. ...
AEF05410     309 ---------------------------------------------------------------------------dqpdw 313 Alteromonas sp....
Feature 1                                #  ##                                                   
ZP_01885423  395 IFLSFVTKYLPqGLIGLLIAIIFLASMGSTASALNSLASTTVIDIYKRLirkng--tdheyLQASRLATVFWGLVCIgma 472 Pedobacter sp. ...
YP_001087158 306 IMITFILNELPvGAIGIIIAGVFAAAMSSIDSILNSMTTVFTKDIYEFYfkkdn---kessLKVTMIITVVIGVVMTgfi 382 Clostridium dif...
NP_936159    300 VILDFVFNYTNpTVVGLIISALAAAAMSTLDSTYNSMATVATFDIYKRFvrksa--ddehyEKVARKMSLLAAAMVVvpa 377 Vibrio vulnific...
ADO83355     306 IMIDFIVNHLPvGVVGLVIAGAFAAAMSSIDSLLNSMSTVFVKDIYERFfskdh---qeasLKMSMTVSAVWGVVIIift 382 Ilyobacter poly...
EFK12349     319 LVPYFLMEYFPkGILGILIAGFFAASMSSIDSALNSLSAATYQDFLVRMfpklsnisdaarVRFSRWLTVFWGIVATgfa 398 delta proteobac...
AEN74276     316 MIPVFIKHYVPtGITGVLLAAMFAAVMSSIDSAFNSLAAATVQDIYARYvrpea--sdrhyLNISRLMTVVWGLLCTgfa 393 Rhodothermus ma...
AEH01430     329 MVPVFIIKYLPnGVIGILIVAIMSAAMSSLSSTVNSLSAVTLEDFIKRFkpdlp---dkkyVKYSRLLSVFWGLVCLffa 405 Lacinutrix sp. ...
EED36680     324 AVPLYMINALPsGVVGLAIVALFAAAMSSLDSVINSLSATTMEDFVRRFhrghw--ddrkeLLLSRLLTVTWGTITLima 401 gamma proteobac...
AEE21390     314 MMPMFILNYLPhGLIGLLVVAILAAAMSSLSSAINSLSAVTIEDYCRITnkels---qggyLKLAKYMGLVWGAITLvls 390 Glaciecola sp. ...
AEF05410     314 LMPIFIVNYLPnGILGLLLVAILAAAMSSLSSAINSLAAVSVEDYCRVVgktls---pestLQVAKYTGMFWGLLTLsls 390 Alteromonas sp....
Feature 1                                                                                        
ZP_01885423  473 lv--asqiGNLLEAVNILGSYIYGTILGVFLVAFYVKHvnGRAVFFAALLTEGIIILIgrn--dwVAYLWLNVIGCVLVV 548 Pedobacter sp. ...
YP_001087158 383 imgfggsiKSILDLVGNYISYFAGPATGAFVLAMFTYKanDKGVSIGFIVGLVLGFFIsnk--ynVSWLWNPAIGATITL 460 Clostridium dif...
NP_936159    378 ll--avsnESVLKTIASLTSIFVGIRLGSFVLGLFWVKanEKGVIVGSIMSVIAVFTAmy---ldVAWPWFAPIGTFVFL 452 Vibrio vulnific...
ADO83355     383 llgfsgttKSVLETVGSYISYISGPMCGAFFLALFTTKanDKGVTGGVVLGFFITLMFgky--agASWIWKPAVGLVSTY 460 Ilyobacter poly...
EFK12349     399 lq-miggpETVLELVNKIGSAFYGPILAVFWLGILTRRgsEAGAISGLAAGVGFNIFLwrfygstVSWLWWNVFGFLISF 477 delta proteobac...
AEN74276     394 fl-agglaPTVIEGINKIGSVFYGPILAAFLLAILSRRatGVGVIAGLLAGVGVNLVLwlcfeaeVSWLWWNAIGCIVTL 472 Rhodothermus ma...
AEH01430     406 ff-agsieGTVIEVINKVSSVFYGPILAAFILAILTKKthALGANLGIVAGVLFNIYLwly-vpsIFWFWWNVIGCLITI 483 Lacinutrix sp. ...
EED36680     402 fy-vgdiaTTVLEAINKIGSLANGPILAVFLLGFFTRRvgGTAAVMGLVTGVLVNGWLwrf-qpdISWLWWNPLGFAVTW 479 gamma proteobac...
AEE21390     391 ly-agniaPTIIEAINKVGSLFYGPILAVFLLAVLTKStsGLHVNIGLISGVLFNLLIsii-apeIFWFWWNFIGFVVTI 468 Glaciecola sp. ...
AEF05410     391 fv-vddiaPTIIEAINKIGSVCFGPILATFFLGVCTKHllAKQVNTGLIAGVLVNIYLwla-qpdVFWFWWNVTGFLTAL 468 Alteromonas sp....
Feature 1               
ZP_01885423  549 LLSVVIQ 555 Pedobacter sp. BAL39
YP_001087158 461 IFGYIFS 467 Clostridium difficile 630
NP_936159    453 LFGVLVS 459 Vibrio vulnificus YJ016
ADO83355     461 SVGYLLS 467 Ilyobacter polytropus DSM 2926
EFK12349     478 GVGFGLS 484 delta proteobacterium NaphS2
AEN74276     473 GVAVLLG 479 Rhodothermus marinus SG0.5JP17-172
AEH01430     484 IIALVVS 490 Lacinutrix sp. 5H-3-7-4
EED36680     480 GAACAVT 486 gamma proteobacterium NOR51-B
AEE21390     469 VMAVVMS 475 Glaciecola sp. 4H-3-7+YE-5
AEF05410     469 SVSLGVY 475 Alteromonas sp. enrichment culture clone SN2

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