Conserved Protein Domain Family
SLC5sbd_NIS-like_u1

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cd11493: SLC5sbd_NIS-like_u1 
uncharacterized subgroup of the Na(+)/iodide (NIS) cotransporter subfamily; putative solute-binding domain
Proteins belonging to the same subfamily as this uncharacterized subgroup include i) NIS, which transports I-, and other anions including ClO4-, SCN-, and Br-, ii) SMVT, which transports biotin, pantothenic acid and lipoate, and iii) the Na(+)/monocarboxylate cotransporters SMCT1 and 2. SMCT1 is a high-affinity transporter while SMCT2 is a low-affinity transporter. This subgroup belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271384
Aligned: 27 rows
Threshold Bit Score: 396.584
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                        #  #                            
YP_444520    123 DFVVLTVYLLGVAAFGVWAg--gAQESTEDYFLGGRdLPWWAVCFSVVATETSTLTVVGVPAVAYGG--TLTFLQITLGY 198 Salinibacter ru...
YP_001940779  40 DCAVVLFFFLVTLGIGLASsrngHEKKYDELTLGGRrMPWWAVLGSIIAAETSAGAFLGTPAEGYVLk-DFTYLQLALGT 118 Methylokorus in...
EGU54950       9 DWAVFALYFALIAYTGWHFsr-vKITSTKDYFLGGNsMPMWVVAVSVLATSQSAATFLGGPESSYRG--NLTYLATNIGG 85  Vibrio tubiashi...
YP_001876796   4 DLFVIVIYFLAIFCIGIYAg--rKQNSLTDYALGNRsLPWWAILASILAAEISAATFLGAPGEGYHTr-NFTYAQLCIGT 80  Akkermansia muc...
AEP28789       9 DWLIFGGYGLILIVSGWLYn--rQAANSNDYFLGGKsMPMWVVAISVLATSQSAATFLGGPDQGYRG--DLTYLATNIAG 84  Glaciecola nitr...
YP_826028      5 DLAIILVYLIAITLFGARFr--sGQKNLRDYFLGGRtAPWWAISLSIVSAETSTLTIVGTPALAFGG--NLGFLQIVFGY 80  Solibacter usit...
ADV63831       5 DLVIVAVYVVGCTVLGAWLgrstATQGLQGYFLGARaAPTWAIMLSIVATETSTVTFLSLPGAAYKEggDLRYLQLTIGY 84  Isosphaera pall...
YP_663723      9 DWLVFVAYGLLLLGSGWFFn--rRSANSQDYFRGGNtMPVWAVAISVLATSQSAATFLGGPDQGYRG--DLSYLATNLGA 84  Pseudoalteromon...
EGM77344       9 DWLMFVLYFVLLALTGWWInr-sGAKNSQEYFIGSNsMPTWLAAISVLATAQSAATFLGGPDIGYRS--NLTYLASTLGA 85  Rheinheimera sp...
NP_867855      7 DLAVLVIYMLAMVAFGIWVg--rDQKDLAGYLLGGRsMPWWSILGSIVATETSTATFLSVPGIAFAVdgDMRFLQLGMGL 84  Rhodopirellula ...
Feature 1                                                                                        
YP_444520    199 LVGRILVGAYVLPRYYAGQLeTAYAFLGDRYGSTMQGAASVTFLGTRLLADGVRLFATAIPLKVIANMSgvd-------- 270 Salinibacter ru...
YP_001940779 119 VLARVIIGFLFIKPFFQSGVhSIYQFLEIRFGPLTQKMASATFLFSRMLATGTRLYVAAIILVVGAQVLlqkplnrfqei 198 Methylokorus in...
EGU54950      86 ILGALFVAWVLIPKFYHNKVsTVYELLKVRFGEKTKQRAGLMYLVGRVFASGSRLYMAAIAVSMILFTNiep-------- 157 Vibrio tubiashi...
YP_001876796  81 ILGRIIVGRLFLKPYYDYKVvSIYEYLEKRFGLLTRRTASMVFLISRVLASGTRLYFAGILLVIAYQFLtgvtadadqiv 160 Akkermansia muc...
AEP28789      85 FIAAIFVAKFLLPKFYKFKVfTVYELLAQRFGDQAKYQAGTVYLVGRLFASGARLYMAAIAIAMILFGNiea-------- 156 Glaciecola nitr...
YP_826028     81 LLARIVISFVFLPQYFKGEMfTAYELMRRRFGERVRKLTASIFLVTRALAEGVRVFAISLVISIVLGTG----------- 149 Solibacter usit...
ADV63831      85 ILGRFLVAGVLLPAYFRGEIySAYEVLGQRFGGSVKTVASLMFLTMRSLGDGLRLALTSQVIHLLTGLD----------- 153 Isosphaera pall...
YP_663723     85 FVAAFFVATFLIPKFYKFNVyTVYELLEVRFGPTAKKQAGLMYLCGRIFASGARLYMAAIAVSMILFADiea-------- 156 Pseudoalteromon...
EGM77344      86 LMAAFFVGYFLIPRFYRYKVsTVYELLELRFGSKAKKQAGLMYLFGRIFANGARLYMAAIAVSMILFTDial-------- 157 Rheinheimera sp...
NP_867855     85 VIGRLIVAIVLVPLFRRGEIySAYEILATRFGGSSKRFASLLFLVTRNLGDGLRLFLAGIALEKVLSVD----------- 153 Rhodopirellula ...
Feature 1                                                                                        
YP_444520    271 atYFQIILVIGVATAVYTLVGGIRAVVWMDVVQMGLYVGGALAAIGFLLGDvPPGWWGKAAAAGKTNLIDlgldasfgr- 349 Salinibacter ru...
YP_001940779 199 llYFFSIFIISSFTAFYTALGGIKAVIWTDLIQALIMLFGGIFALLFILLKlSAVYPEAEILHQLFHRPWlttginpskn 278 Methylokorus in...
EGU54950     158 ssVITSVVILVVVGLAYTYMGGIRSVIWSDLIQLIVYVGAALAVIVYLLGQiPADMGQIVHALQNPGNDQiskltlfdfs 237 Vibrio tubiashi...
YP_001876796 161 llYIAALVAISVATTIYTAIGGLKAVVWTDVLQAVVLGVSMLSALWVLFSHiPGGWSSISAAMNGGDDWKffswgtgegl 240 Akkermansia muc...
AEP28789     157 ssVMISITLIATVGLLYTVYGGIRTVIYSDVIQCIVYISAALLVLGYLLYSiPSDFSTIINALQTPTDGSqskltlidfs 236 Glaciecola nitr...
YP_826028    150 --EIASIVLIVLLTLFYTFEGGMTAVIWTDVVQMTLYIIGAIASFAIILGKiPGGWEHVSAVAGAAHKFTvfdfrfafdm 227 Solibacter usit...
ADV63831     154 --MTASILVMGGATILYTYLGGMTAVIWTDVIQFVVYILGGGLALGILTQAvGGFEAIILAEPEKFRVFHlnfaws---- 227 Isosphaera pall...
YP_663723    157 shVVAATCILTVAGLMYTVYGGIKTVIYSDVIQCCVYVGAAVAVIYCLLAAiPSDMSSIMAVLAEPGAGQasklalfkfd 236 Pseudoalteromon...
EGM77344     158 hhVIWSIALLCLVALLYSIFGGIKSVIYGDAFQCFVYVGAAVLVLLYLWQSiPADFATVWQALEHPPENAasklllidts 237 Rheinheimera sp...
NP_867855    154 --LVSCIVILGVFTIVYTFFGGIKAVIWSDCIQLVVYMVGGVLSLQILVNYfPGGWQQLVEFGQETGRFHvfdfrvrate 231 Rhodopirellula ...
Feature 1                                                                                        
YP_444520    350 --------wwtqpytlGTAVVGGAIFSMASHGTDQLIVQRLLACRSEADsQKAVVGSALIVMVQFALFLGVGLLLWAHYD 421 Salinibacter ru...
YP_001940779 279 lfg-nlfdilaldytlWSALIGSTFTTMATHGTDQDIVQRLLTAKNYQKsRLSLILSGLADIPIGFLFLSIGLLLSFYYS 357 Methylokorus in...
EGU54950     238 l-----dfspagtfsfWACITGFVLLNIGAFGLDQDMTQRVLTCKNAKQgSQAMINSIIFSIPVVLVFMTIGLLLYVFYQ 312 Vibrio tubiashi...
YP_001876796 241 dflqqgarvlgqeytvWAAFLGATFITMATHGTDQDMVQRMLAAKNSKAgTRAVIVSGLLDFPIVIIFLFTGILLYVFYQ 320 Akkermansia muc...
AEP28789     237 l-----dfspsgvfgfWSVITGFVLLNIAAFGMDQDVTQRMLTCKDSKEaTKALTSSIIMGIPVVLIFVIIGMLLYIYYQ 311 Glaciecola nitr...
YP_826028    228 -------qffartysfWAGVAGGCFLTTASHGTDQLMVQRLLSARDERQsRTALFASWVVIFFQFTLFLLIGVLLFVYYG 300 Solibacter usit...
ADV63831     228 -----------dpfnlWAGIGGGMVLSMATHGTDQLMVQRYLAARGPRQaAAALITSGFVVAGQFALFLVIGVALAAYFA 296 Isosphaera pall...
YP_663723    237 w-----dfspsgvfniWSVFTGFVLLNIAAFGLDQDMTQRVLTCKNAKEgSKAMLYSIVMVIPIMLLFIVIGLLLYVYYQ 311 Pseudoalteromon...
EGM77344     238 w-----dfssasaftvYSSVTGLFLLYIASFGLDQDMTQRALTCKNARQgSLAIIWSVVLVIPVTLLFIVIGFLLHIFYQ 312 Rheinheimera sp...
NP_867855    232 t-----fsvltepftfWSGVIGGAVLTLGTHGTDQMIVQRYLAARSTVDaQRAVVASGVVVLIQFALFLVLGVALACFYS 306 Rhodopirellula ...
Feature 1                                                          #  ##                         
YP_444520    422 GASVealgl-----------qrgdeVFPKYIIEGL-PAGLSGLILAGIVAAAMSSLSSSLNALASSSVNDLyerisghs- 488 Salinibacter ru...
YP_001940779 358 AYVDpslpa------------npneVFPYFIVSQL-PGGIRGLVIAAIFATATGSLSAALNALATSFCQDWlqpsfdrl- 423 Methylokorus in...
EGU54950     313 RPELmgvegkevv---qnfngenvtIFMYYVLNEM-PAGLRGLVTVGVVAAALSTLNSGLNSMSSVAVQDLyrpwkenrd 388 Vibrio tubiashi...
YP_001876796 321 YNPAnlpad-----------tpqlhVFPYFIIHEL-PNGIRGLLIAGLLATAMGSLSTALNSLATTATKDWyqgifkpe- 387 Akkermansia muc...
AEP28789     312 RPDLmsqsiangdaptpefvgqtvtIFMYYVLTDL-PNGIKAVVTIGIIAAALSTLNSGLNSMSSVAVQDIyrgillkng 390 Glaciecola nitr...
YP_826028    301 DQGLnapa-------------qkdrIYPEFVWHNL-PPGLAGLIIAAILAAAMANLSAALNSLASTTVVDFyraraks-- 364 Solibacter usit...
ADV63831     297 SDPAlavtap----------akadaAFATFLTSPAmPTGVRGVIVAALIAAAMSTLSSSLTASSASTVSDLilpclhpe- 365 Isosphaera pall...
YP_663723    312 RPDLmhsgaagevl--ptfegepvtIFMYYVLNHI-PAGVKALVTVGIIAAALSTLNSGLNSMASVLVQDIyapwqkkkg 388 Pseudoalteromon...
EGM77344     313 RPDLmagsgalmqs--sqfsgenitVFMYYVLHEM-PAGLRGLVTVGVIAAAVSTLTSGLNSMASVIIQDLykpwqqqrs 389 Rheinheimera sp...
NP_867855    307 QIHPrafe-------------hndeVFAAFIVDYL-PVGLVGITLAAVFAAAMSTLSSSLNSSASAAVSDFyqpwllary 372 Rhodopirellula ...
Feature 1                                                                                        
YP_444520    489 ---------------msadrglRVSRLLTLFWGVVfigfasl-----fqdssnpVVELGLSIASFTYGGLLGAFLLGLWH 548 Salinibacter ru...
YP_001940779 424 ---------------adekkkvATLRRATLLFALLtssigmatalytvyspsarILPIILGIIGFTYGPLLGVFLLGMLT 488 Methylokorus in...
EGU54950     389 -------------gkqddfhyvKAGRFGMAVAATAlgsmgilcf-ywqqytdmpLLSFALSVMVFAYTGLLGVYFTAIFT 454 Vibrio tubiashi...
YP_001876796 388 ---------------aterqllRCVRWGTAVFSLLlilvgsitawyvvhhpevrIIQIALGIFGYTYGSLLGIFLLGMLT 452 Akkermansia muc...
AEP28789     391 -------------ktlsdthmvKAGRISMIVVAIAlslmaalcf-ywqqhsdmpLLAFALSVMIFSYSGLLGVYFTALFS 456 Glaciecola nitr...
YP_826028    365 ---------------lsdasalKIARWATIAWGLVllaiaia------argstsVLEAGLTIGSIPMGALLGVFLLGVLT 423 Solibacter usit...
ADV63831     366 --------------arrsktvlRLSMGLTVVWGLVqvgigwa-----cvdirsqAIDNVLAIASLGAGLILGLFLLGTFV 426 Isosphaera pall...
YP_663723    389 -------------nrhsdmhfvSAGRVAMGLVAAAlgamaclcf-ywqqytdtpLLQFALGVMVFSYSGLLGVYFTAIFT 454 Pseudoalteromon...
EGM77344     390 --------------ekpeqyyvAAARWSMLLCATAlalmailcf-ywqqksdmpLLTFALGVMVFSYSGLLGVYASALFS 454 Rheinheimera sp...
NP_867855    373 nrssdketdeksfdretsgnllGVSRKLTIAFGLIqigigig-----asylsssVISDALAIAGFTAGILLGVFLLGILT 447 Rhodopirellula ...
Feature 1                                                                                   
YP_444520    549 Rgtr-qvDALVAFVVSIGVMVLVIFGVWhsptegwlfvlnpsdarveaanlrtIGWPWYTALGTAVNLVIGSVLA 622 Salinibacter ruber D...
YP_001940779 489 DnrgsdlGNVVAMIMGFLAVLVLSGIPAfdfqayenkr-----alpflhffphIAYPWRIGIGSLVTFCIGLLFS 558 Methylokorus inferno...
EGU54950     455 Krgs-eaSVAMALIAGFLTTLLLQAYVWdsimgvin----------pewvgvqLAFPYQLCIGTLVSLCVCLCGK 518 Vibrio tubiashii ATC...
YP_001876796 453 RtrgsdsGNIIAMAAGFFVIALLTELIPlpsgwq--------------qyvpeIAFPWRVTIGTLVTFTVGFCFR 513 Akkermansia muciniph...
AEP28789     457 Nrgs-plSILAALIIGFLIPVLMQPYIMslylpv--------------eyqfsLGFSWQLMIATFVATSVCLLGN 516 Glaciecola nitratire...
YP_826028    424 Rkpr-egAAIAGVACGLAAVLGTRFFTP-------------------------VAWTWYVLIGTVTTFGVGLAAS 472 Solibacter usitatus ...
ADV63831     427 Vp-----AGPRAALIGLLTGAAVIFGAKfg---------------------ldLAFPWFAPLGAGTVFLVGGLLA 475 Isosphaera pallida A...
YP_663723    455 Krgs-pqSVLAALICGFMTTLLFQPYIMtlylpq--------------dwivhIGFTWQLCIATLVASLVCLSGK 514 Pseudoalteromonas at...
EGM77344     455 Krgs-paSVLAALIAGFVITLLLQPYLQsyylpa--------------dwqfdLAFSWQLCIGFACSFVICQLGK 514 Rheinheimera sp. A13L
NP_867855    448 Tsah-qrGALIGMVSGMVVLTAIKFGTA-------------------------VAWPWFAIIGSVTTFTAGYIAS 496 Rhodopirellula balti...

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