Conserved Protein Domain Family
SLC5sbd_u4

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cd11480: SLC5sbd_u4 
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain
SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271374
Aligned: 113 rows
Threshold Bit Score: 267.448
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                       #  #                             
ADU50561      45 IGYVFLATTFLIYAaig--iwsRTRVLDEYYVAGRsIPAIYNGMATAADWMSGASFISMAGILYALGYDGMAYIMGWTGG 122 Thermaerobacter...
EGB14016      11 ALLLIGCMLAFTVVttf--mfrSQKTSADYYLAGRkVNSFINASAISSDYLSAASFLGVAGVAFLFGFDGIIYALGFFVG 88  Desulfovibrio s...
ACA58833       7 FTIVIASILLTMYIswa--srrHTRTTAAFYVAEGkIPWRLNGAAMLGDYCSAASFLGVAGAVALVGVDGWWLALGFFAA 84  Candidatus Desu...
ADU50558       7 VWLTLALLFSSLVLgsl--arrYIQTTVDFYLAGRrIGYLANASAICGDYFSAASFLGVAAAVYAVGYDGLLYGLGFGAG 84  Thermaerobacter...
AEG31642       7 FGVVVLGILLSLYIsyy--hrrSTASTANFYVAGGgISPRVNGMAMFGDYASAASFLGVAGAVALMGVDGWWLALGFFAA 84  Thioalkalimicro...
AEF93402       7 LIIVVISLFFTLFVawy--srrWTRTTDEFFVAGGkISWVSNGLALIGDYLSAASFLGVAGAVAIFGIDRFWDGLGYFAG 84  Desulfotomaculu...
ACA39058       9 KMLMTIALMGTIVYity--ltkRNATASDFFVGGRsFGWFTNGSAIGGDYLSAATFLGIAGLTFQLGYDGAYYAFCFSIG 86  Lysinibacillus ...
AEG43818       4 PSTIVLAVVLALVAaaaitmrpRGTSTVDFYLAGQrVGVVTNAWAICGDYFSAASFLGVAAAVYVSGLDGAWYAVGFAAG 83  Isoptericola va...
YP_003763801   4 ALAVAPVVLVTLLIgvr--gvaAMRTTSDFLVASRrISPLVNSAAVSGEYLSAASFLGIAGLVVKDGIGALWYPVGFTAG 81  Amycolatopsis m...
YP_003762362   8 LTGIVLVAVVTPYLghr--ssrSATSTHDFLVARRtVRSRRNAAAISGEYLSAASFLGIAGIVLKDGADALWFPIGFTAG 85  Amycolatopsis m...
Feature 1                                                                                        
ADU50561     123 YVLLALLLAPYLRKFGKYTIPDFIGDRFq--sNATRVVAVIATVIISGTYLIAQITGVGIVMSRFLQID---------IS 191 Thermaerobacter...
EGB14016      89 YIALLLFLASPLRKFGRYTVPDFVSERFh--sKPARVLGVIGVLFISLFYMAPQMLGAGKVMGLLLNLD---------YS 157 Desulfovibrio s...
ACA58833      85 WIVVLLVIAGPLKSTGKYTVGDVLSARFggreSGIRIVAMLSTLVLCTLYLVPQMVGAGHLFKLLLGWD---------YL 155 Candidatus Desu...
ADU50558      85 FLPVLLFVAAPLRRSGAFTLPSFCGLRFa--sRAARLTAVALVLVIVTLYLVPQMIAAGSTWTMLVGYGlpg---itpYA 159 Thermaerobacter...
AEG31642      85 WIVVLLIIAGPLKNVGKFTVADVLNARYegseKGIRMIAMISTLVLCVMYLVPQIVGAGLLFNLLLGWD---------YL 155 Thioalkalimicro...
AEF93402      85 YMTVLFIIASALRNTGKFTVADVLMARFd--wKYIRIVSAVTTLVICTFYLVPQIIGAGGLFHLLLGWD---------YM 153 Desulfotomaculu...
ACA39058      87 LTLLAIFVAGPLRRFGAFTVADFLGYRFh--sKRARLVAVAVVLAISGFYAAPQLLGAAQILSMFFGTS---------YE 155 Lysinibacillus ...
AEG43818      84 FVPVLLFLAAPLRRFGEFSIPDFLGRRLg--sERVRLVAVGVVQLVILSYLVPQAVGSGITWELLVGQGvag---lspYA 158 Isoptericola va...
YP_003763801  82 YIAMLVLVAAPMRRSGALTVPDFAEARLn--sPALRRLAAVVVLVIGTIYVVPQFRTAGLVLAAVGGTP---------YW 150 Amycolatopsis m...
YP_003762362  86 YLALMLFVAAPLRRSGAYTLPDFVEMRLg--sQGLRRFSTAFVVFIGILYMAPQLQGAGLTLATVVPVPawagaivvmIL 163 Amycolatopsis m...
Feature 1                                                                                        
ADU50561     192 VGVFLGLLGVLFCSFLGGMRA-----ITWTQVAQYIVLIVAYLIPITLLAHQqtgvplp--------------------- 245 Thermaerobacter...
EGB14016     158 TSIVIIACIITFYVTVGGMKA-----TTVNQLVQFWILFGAMFLLAFIPFMIkgytytd--------------------- 211 Desulfovibrio s...
ACA58833     156 PTVLVTGTLMAVYVIVGGMRG-----TTYNQAIQGILLFGAMLGILIWVSIShfggnplaiversqemvpp--------- 221 Candidatus Desu...
ADU50558     160 TGVTAAAVIMTAYVVLGGMRA-----TTWNQVVQFGVLLSAVVTVLVLAYVRgfrylda--------------------- 213 Thermaerobacter...
AEG31642     156 YTVIVTGSLMAIFVIMGGMKG-----TSYNQAVQGAILFGALMFLLVFGIIAffggnpvgmviegkeivppl-------- 222 Thioalkalimicro...
AEF93402     154 FTMVLVGSMMAIYVILGGMRG-----TTYNQIIQGVVLWSVMLFIFILVTVKyfdgnplkiihsahstipp--------- 219 Desulfotomaculu...
ACA39058     156 FGIIFTCVVMIFYVGIGGMKG-----TTINQALELWIRLGAFIVMLVAAVYSglhydkilaains--------------- 215 Lysinibacillus ...
AEG43818     159 TGILVSTTVVAGLVAFGGMRG-----TTWTQAVQFLLLLAALVWLAGVVLGEgfrygdavanlse--------------- 218 Isoptericola va...
YP_003763801 151 VGVVLAGAAVSVTLALGGMRA-----ATYVQAFQFVLKLLLFLIPAIWLVLQagavnrtdalnpvefthfaretpvrf-- 223 Amycolatopsis m...
YP_003762362 164 VAFNVISGGMRAITVVQAFQYwlklfAIAVPAFVLCMVFFTGGGPDGFRPLGapappvfindttvdvqtdvtlhvtsdty 243 Amycolatopsis m...
Feature 1                                                                                        
ADU50561     246 ------------------qlmqgqaLQQVTALEPq----------------hGITKPFVEPFnet-ggmFQFLALTLSLM 290 Thermaerobacter...
EGB14016     212 ------------------vvkflhdFKGAAPISGk----------------eFDGAAYTSPAywl-tslKDTLSLLLALM 256 Desulfovibrio s...
ACA58833     222 ------avvtkevagtlaqmetadaAAAVATAREq----------------mPDAPDAITPGvel-rdlANQASLVLGLF 278 Candidatus Desu...
ADU50558     214 -------------------laelgrQPVAAENRLh----------------pGLAAGFLHPGlrf--dlFDQISLLLSLV 256 Thermaerobacter...
AEG31642     223 -----vaagnaeavaaiagmtnaesAVAIETVRGm----------------mTDAPNAISPGvgl-rdlMNNASLVLALF 280 Thioalkalimicro...
AEF93402     220 ------qvsqtvaaelltgtsggnsKEVIMSVNNl----------------lVGKESALTPGvfs-kslPDQISFVLALL 276 Desulfotomaculu...
ACA39058     216 ------------fsgpisgtspyalDGNEVNFDGa----------------aWTGTGFYFPTf------WQTISMTIGLA 261 Lysinibacillus ...
AEG43818     219 ------------aplvnpvlddgrgELVTEENQIh----------------pGEPASFGEPGary--ggVGQFALIVTLA 268 Isoptericola va...
YP_003763801 224 evdvtmeireptpvrrngvvetlppGEFTAHSQDevvfgtgaavpavrggaaLGGPDWRRPL-------LDLGDQGYPLL 296 Amycolatopsis m...
YP_003762362 244 lyaygrtdngpaagpthwtplaphtVSEGTKLKFvagtpvp-----vvsdasADNANWLHPAsgsltdlLQTYSLMFATF 318 Amycolatopsis m...
Feature 1                                                                                        
ADU50561     291 VGTAGLPHVLVRFYTVPNv----------RQARWSVGWALLFIFLLYFTAPAYAAFVRWEILqnvagraidqlpawvqaw 360 Thermaerobacter...
EGB14016     257 FGTAGLPHILVRFYTAPDg----------KAARRTVIYVLFLIGMFYIMSPYVGHVIRYVFLkgeamgvsph-------- 318 Desulfovibrio s...
ACA58833     279 LGTLGLPHILIRFYTVRNa----------RAARKSAEFTIWGLAIFYAAVLLVGLAAMYVMYptlvqlla---------- 338 Candidatus Desu...
ADU50558     257 FGTAGLPHIMHRYFTSPTg----------AQARRATAWVLGLVTLFYVLTGAVGVAARAMLPggpagggggtvvepgsag 326 Thermaerobacter...
AEG31642     281 LGVLGLPHILIRFYTVSNa----------KDARKSAEFTIWGLAIFYGSVFFVGLIAMYALYptlvella---------- 340 Thioalkalimicro...
AEF93402     277 LGVAGLPHILTRLYTVPDa----------TEAKKSLALTLAGLSIFYIATCFVGLAAMIVLYpdllallv---------- 336 Desulfotomaculu...
ACA39058     262 LGTIGLPHILLRFYTNPSa----------KAARKSALMAIGIASTFFFLAVYLGVVGRSIFIsgtaseevm--------- 322 Lysinibacillus ...
AEG43818     269 LGTAGLPHVMNRYFTSPTg----------TAARTTTVWVLGLAGLFYALAVMLGTAARELIPgavadhawlre------- 331 Isoptericola va...
YP_003763801 297 GTWAVLIATMLGTMGLPHvlmrfhtspdgRAARRTAAITVALLGVFYLFPGVYGVLGRVLVPglyl-------------- 362 Amycolatopsis m...
YP_003762362 319 LGTMGLPHVLVRFYTNPDg----------KAARRTTVHVLLLLGLFYLFPTLLGALSRMYVPellv-------------- 374 Amycolatopsis m...
Feature 1                                                                               #  ##    
ADU50561     361 aktgli-----------nlaaadanangileaveldrvmntDIVVLAAPEIAGl---PYVFAGLVAAGGLAAALSTADGL 426 Thermaerobacter...
EGB14016     319 -------------------------------lmqwladngkNLAVPVAGSYFG----GQILLGIVVAGAFAAILSTVAGL 363 Desulfovibrio s...
ACA58833     339 ---------------------------------egqrgkatNMAVPMLGQLLG----GEIVLGIIAAGAMAAMLSTAVGL 381 Candidatus Desu...
ADU50558     327 rqaaaegappvgvppldagagegavagtgmaevpevalrdpDMVVPALAWRVG----GDAVLALVAAGAFAAIYSTIGGL 402 Thermaerobacter...
AEG31642     341 ---------------------------------agqrgvatNMTMPMLGEMMG----GQLLMGVIAAGAMAAMLSTSAGL 383 Thioalkalimicro...
AEF93402     337 ---------------------------------qgksgiatNMVVPLLSQMIG----GEFLMGLAAAGAVAAMLSTAAGL 379 Desulfotomaculu...
ACA39058     323 ---------------------------------rdlvlggnNMVIPTTALALG----GKWLLGLVIAGAFAAIFSNLSGL 365 Lysinibacillus ...
AEG43818     332 -------------------------------ltvdgvlrvpEHALPVLGRIYG----GDAGLGIVAAGALIAVMSTIAGL 376 Isoptericola va...
YP_003763801 363 -------------------------------------sgatDTVVVALPYQVDsgwtGGLFTALLTAGAFAAFLATSLGL 405 Amycolatopsis m...
YP_003762362 375 -------------------------------------tgktDAAILQLPSAILpgvgGQLLGAVTAAGAFAAFLSSTSGL 417 Amycolatopsis m...
Feature 1                                                                                        
ADU50561     427 LIAVSAAISHDLYykvlnpnastaqrLMLSRIMVLIVAAVGAWIaty---------rlaLIAQIVAWAFSLAAASLFPVL 497 Thermaerobacter...
EGB14016     364 IIACAGAIGHDLVvnvfnpdmpersrVKVARIASVCVGLLGIPLgfwa--------esmQIAILVGLAFAIAASTFFPVL 435 Desulfovibrio s...
ACA58833     382 LISATTSLSHDLYatvlrpqstdrerVLFAKTGAGFLAAVSIVLalwl--------rdqNVGVLVAMCFGIAASTFAPAL 453 Candidatus Desu...
ADU50558     403 LIAAAAAIGHDLYeeltgg-gpeqrrVLVGRLTAAGTGGAALAVglafgrwgpggqepgLFAQMVTWAFAVAASGFFPVL 481 Thermaerobacter...
AEG31642     384 LISATTSLSHDLYkgvlrpnstdaeqVRFAKFGAGTLAVVAIGMsiwl--------qeqNVAMLVAMCFGIAASTFAPAL 455 Thioalkalimicro...
AEF93402     380 MISATTCLAHDIYakllrpgasqaeqLRFAKAGAAVLSIIAIILsivl--------kdqGISFLVAISFGIGASTFAPAL 451 Desulfotomaculu...
ACA39058     366 FITSSGALAHDLYanimkkditqkqrVIAGKVAIVLLGILYGALgllv--------kdaSIGHLVALAFTVAASTFTPIF 437 Lysinibacillus ...
AEG43818     377 LLASAASWGHDVYerhinpratqrqaVYAGRLTTLVAACAAAAValavrpesfssitpsIVATMVTWAFAVAGSALTPVF 456 Isoptericola va...
YP_003763801 406 LLVMSGALAHDLVpg----------gLRRLRIAVFGVAGVMVLLalrs--------aelDAGVLVTWGFTVAASTFCPLL 467 Amycolatopsis m...
YP_003762362 418 LVSVAGVVSTDLLpg----------rVRDFRVAAGLVALFPIGLaval--------rpeDISLSIGLTFALAASTFSPLL 479 Amycolatopsis m...
Feature 1                                                                                   
ADU50561     498 VLGIWWKRAnakGAMAGIISGLAVTLAYMvanyttqga--------fnilgishTAAGIFGMPVNFLVAYLVSRA 564 Thermaerobacter mari...
EGB14016     436 VMGVWWPKMtkgGACAGLVTGIIGSFAMIlgksml-------------phflqyNNPGGFVMILTFIAIYAVSKM 497 Desulfovibrio sp. ND132
ACA58833     454 VFTVWWTRLtrqAVVAGMGVGLVLSLVLTfakffnvp---------hllgvpvlVNPALYSVPAAILVTVLVAYL 519 Candidatus Desulforu...
ADU50558     482 TLGIWWRGMtaaGAVAAMVAGGGGSLALIlwgvgqqlgwwpapaaasgldavpaTFPTAVTLPLGFAAGVAGTLL 556 Thermaerobacter mari...
AEG31642     456 VFAVWWRKLtsqAVIIGMAAGLVSSLIFTfaaffgtk---------tvlgidvlVNPALYSVPLAVIVTVVVSYL 521 Thioalkalimicrobium ...
AEF93402     452 ILAIWWEKLtkeGVVVGMCTGLAVSILFTvamfmksk---------nifglpvlVNPAVYSVTAAFVVTVVVSKL 517 Desulfotomaculum car...
ACA39058     438 ILGIWWRGMtekGAIAGLLIGLGVSMWMIflpgtl-------------psflqfKIPGIVTVPVGFLSVIIVSLL 499 Lysinibacillus sphae...
AEG43818     457 VLAVWWRGTtaaGAVAGMVTGTALAVTMFvtgtlael----------plvgevlATPTILAAPAAGAVTVLVSRR 521 Isoptericola variabi...
YP_003763801 468 VLGIWWPRLtatGGIAGVLTGLVASSGSIlfalagppl--------hgwvailvQQPAPWSVPLAFGAMALVSLR 534 Amycolatopsis medite...
YP_003762362 480 VLGIWWRKLswpGALAGMFVGGGLVLAALivnvvsgyt--------ggwapwfvNQPALITVPAAFVTTYLVSRV 546 Amycolatopsis medite...

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