Conserved Protein Domain Family
SLC5sbd_u1

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cd11477: SLC5sbd_u1 
Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain
SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.
Statistics
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PSSM-Id: 271371
Aligned: 67 rows
Threshold Bit Score: 336.09
Created: 15-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Na binding site
Feature 1:Na binding site [ion binding site]
Evidence:
  • Comment:based on the structures of Vibrio parahaemolyticus vSGLT (SLC5), Aquifex aeolicus LeuT (SLC6), and the NCS1, Microbacterium liquefaciens Mhp1, bound with Na+, functional studies of Escherichia coli PutP (SLC5) and mammalian NIS (SLC5), and mutational analysis of vSGLT
  • Comment:one of two Na+ binding sites in Aquifex aeolicus LeuT, where it is referred to as the Na binding site 2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                     #  #                            
NP_661868   7 LDISFIAGYLLLTLLVGLFfsrrASENVGEFFLSGRkLPWWIAGTGMVATTFAADTPLAVAGFVAKNGIAGNwVWWTFVS 86  Chlorobium tepidum...
EDY85006    8 FDYGVVGFYFLFMLAIGLLfr-kFIGNTSDFFRGGGqMSWWMAGSSAFMVQFSAWTFTGAASKAYQDGLLVLvIFFGNAV 86  Verrucomicrobiae b...
AEL27536    4 LDYLTIFIFTLIILGAGLSfg-rQGGDMKSFFAAGGaVPWSISGLSLFMSFFSAGTFVVWGSIAYEWGWVAItIQMAMCT 82  Cyclobacterium mar...
ACU61005    6 IDTTVIFIFSAFVLIIGLLfa-rTGRNMKSFFAGGEaVPWFIGGLSLFMSFFSAGTFVAWGSIAYKYGFVSVtIQWTMCL 84  Chitinophaga pinen...
ADO83902    3 VDISVVIVYFGFLISIGYFfrkfASNSTGDYFAGGGkMLWWMVGSTAFMTQFSAWTFTGAAGKAFTDGWTITiLFFANAV 82  Ilyobacter polytro...
ADZ78557    4 IDYVVMAVFALLILCIGMVftysGSKNTSTFFEAGGqTPWWINGLSLFISYFSAGTFVVWGSIAYQEGFVANgIQLTMML 83  Sphingobacterium s...
ACU05778    2 IDTIVVVVFSIFIMLVGISfs-kTGRNLKSFFAGGEsVPWFIGGLSLFMSFFSAGTFVVWGAIAYQHGWVAVtIQWTMCI 80  Pedobacter heparin...
NP_799597   3 YDYLVIAGYFALMVAISLLfkkmASNSTSDYFRGGGkMLWWMVGATAFMTQFSAWTFTGAAGKAFNDGFAVLaVFVGNMV 82  Vibrio parahaemoly...
EFS34002    4 LDYFVILLYFLGLIAVSVVms-rKIKNSEDMFIAGRnSSWWLSGVSSYMTIFSASTFVVWGGVAYKSGIVAViVALCLGV 82  Bacteroides sp. D2
ADE53852    4 IDWLVIGLYFVGLLVVGVLfa-rRNTSASEMFVAGRsSPWWLSGVSAYMTMFSAGTFVVWGGITYEFGMVGPiICAVYGI 82  Coraliomargarita a...
Feature 1                                                                                     
NP_661868  87 GGMLTVFFFARLWRRANIltdlefielrYSGKAASFLRGFKAVYFGLFINAVIIGWVNLAMFKIIKIMIPGl-------- 158 Chlorobium tepidum...
EDY85006   87 GFVANYWYFAAKCRQSRVita----veaMRIRFGKTAEQVFTWLQLPIGTLYAGIWLNGLGVFFSAVFGFD--------- 153 Verrucomicrobiae b...
AEL27536   83 SGFLIGKYLAPKWKETQSitv----aeyLTNRFGKKVQQYYTFIFLVLSLGYTGAFLYPVAKILNVVTGFD--------- 149 Cyclobacterium mar...
ACU61005   85 GGIITAFLLAPRWKRTGAlta----aefIRQRLGAPVQKFYVNIFLLVSLFNKGAVLYPVAKLVSVSLGFP--------- 151 Chitinophaga pinen...
ADO83902   83 GYLMNYLFFAERFRQLRVvtp----meaIRLRFGKVNEQVFTWMNIIPSVLSAAIWLNGLAIFVAAVFKVP--------- 149 Ilyobacter polytro...
ADZ78557   84 GGLMTAIFIAHRWKKTGAlta----aeyIGVRFGVKTQQFYTTLTLLYSLFSVAAVLYPVGKMVNVASGIS--------- 150 Sphingobacterium s...
ACU05778   81 GALITGLYLAPRWKATGNlta----aefIKARLGSNVQKSYIFIFTIVSVFIKGSVLYSVAKLVSGSLDYP--------- 147 Pedobacter heparin...
NP_799597  83 AYVFAYFYFARRFRQMRVdtp----tegVKRRFGNTNEQFFTWVIIPLSVINAGVWLNGLGVFASAVFNAD--------- 149 Vibrio parahaemoly...
EFS34002   83 ASFIVGKWISGKWRQLRIksp----gefLTIRFGHRTVSFYTISGIVARAVHTAVSLYAVAVVMCALIKVDggsifastg 158 Bacteroides sp. D2
ADE53852   83 AAFLAGRFFAGRWHDTGLsta----aefVQLRFSKGAFNFYTIYRGLYLTVHGLSLYALAVMLCPLMPLEEghflrda-- 156 Coraliomargarita a...
Feature 1                                                                                     
NP_661868 159 ----------dPQLTIVGLVIFTAIYSGMSGLWGVSITDAVQFVIAMAGCIILAVLAVNSpqv------taAGGLKQALP 222 Chlorobium tepidum...
EDY85006  154 -----------IKTTVLVTGTVVLILSVTGGSWAVVASDFMQVLVLMPISVVAAFFALREvg--------gVGELVANFP 214 Verrucomicrobiae b...
AEL27536  150 -----------IYYAILLLGGMIMLYTAVGGLWAVIVTDVLQFVILTAAVLIVLPLSLEKvggmnqfiaeaPDTFFNLFN 218 Cyclobacterium mar...
ACU61005  152 -----------LTTCTIVLGLMMIAYTAIGGLWAVMVTDILQFVILTAAVLMVLPLSLDAag--------gWTKFTQQVP 212 Chitinophaga pinen...
ADO83902  150 -----------MTYTIMATGGVVLLMSLTGGAWAVIASDFMQMVTIMAVTVISTIVAIVK-----------GGGVTQLLH 207 Ilyobacter polytro...
ADZ78557  151 -----------IEASVLIIGGIIILYTAAGGLWAVLVTDVVQFVVLSAAVLIVIPLALKDa---------gGIQTFASNA 210 Sphingobacterium s...
ACU05778  148 -----------LMQVTVVLGILMISYTAIGGLWAVMVTDILQFVVLTAAVLIILPMVFNEvg--------gVQGFIDKAP 208 Pedobacter heparin...
NP_799597 150 -----------IVTTIWVTGLAVLAISLLSGAWGVVASDFIQTLVVAVISIACAAVALYVvg--------gPGEIVENFP 210 Vibrio parahaemoly...
EFS34002  159 mlgdspegylsIWWALLILGAIALGYTIAGGFLAVLMTDVIQFGVLLAVVVFMIPLSFNAvg--------gVSAFIDKAN 230 Bacteroides sp. D2
ADE53852  157 -----atgnlsVDWACTILALIVITYTMIGGLWAVLMTDMIQFIVLSACVIVVVPLILKLgg--------sVEQIAANSP 223 Coraliomargarita a...
Feature 1                                                                                     
NP_661868 223 DWmfdffpsfsstvntsatgayalpftafaamAFVQWWASWYPGAEPGGGGYIAQRMMSAKDeknSLLATLWFTIAHYCV 302 Chlorobium tepidum...
EDY85006  215 ADrlfggd------------------tnystlIWIWVVVILLKQFASTNNMMDASRYLCARDt-kEARKGALLASALFII 275 Verrucomicrobiae b...
AEL27536  219 GEy----------------------------tFWFILAFVGYNTIFIGGNWAYVQRYTSVKDt-kSASKVGYLFCALYLI 269 Cyclobacterium mar...
ACU61005  213 ADffnvi--------------------ngeysIGFILAFALYHISYIGGNWTFVQRYTSVDSp-kSAKKVAFLFAGLYLV 271 Chitinophaga pinen...
ADO83902  208 DGmpanpimgt-------------ginhfslfVVWIVFIMLKQFFGTNSIVGGAYRYFAAKDs-kNAKKAAGLACILMAI 273 Ilyobacter polytro...
ADZ78557  211 PDhffdff-------------------nseysIGFFFAFLLYQTIYIGGNWPYVQRYTSVSNe-kNARKVAFLFTGLYLI 270 Sphingobacterium s...
ACU05778  209 DDffnlv--------------------hgeytWGFIFAFAIYHIFYIGGNWTFVQRYTSVDSp-kSASKVAYLFAGLYIL 267 Pedobacter heparin...
NP_799597 211 GGfimgpd------------------mnypllLVCTFIFFVVKQLQSINNMQESYRFLNAKDs-kNASKAALMALVMMLF 271 Vibrio parahaemoly...
EFS34002  231 EIpgffsg------------------tsptytWVWLLLWIFLNVAMIGGDWPFVQRYISVPTt-rDAKKSTYLIGILYLV 291 Bacteroides sp. D2
ADE53852  224 EGfflpt--------------------apgftWFFLVGWMLVNCFQLGAEWHFIQRHLCVPSa-kDARKAMNLFGWLYLV 282 Coraliomargarita a...
Feature 1                                                               #  ##                 
NP_661868 303 RPWPWIVVGLASLVMFPNLpagq--------kedgFVHVMNAVLPaGLKGLLIAAFMAAYMSTLSTHLNWGTSYLINDLY 374 Chlorobium tepidum...
EDY85006  276 GPAVWFIPPMASAILYPDLgamfpql--kkpeeasYVAICIMTLPaGMLGLLMSGIFAATMSSMDSGLNRNAGIFVRNFY 353 Verrucomicrobiae b...
AEL27536  270 SPLIWMLPPMIYRVLDPSLtgle--------tegaYLRMCMSVLPvGMLGLMLGGMIFATASSVNTSLNLAAAVLTNDVY 341 Cyclobacterium mar...
ACU61005  272 SPVIWMLPPMIYRSIDPALtgln--------tenaYLQVCRLVLPpGLMGLMLTGMYFSTSATANTTLNVTSAVITNDIY 343 Chitinophaga pinen...
ADO83902  274 GPLVWFFPAWYVAGHYPDIstwgldnlggkvkdaaYLIFVRNEMPvGMVGLMMAAIFSATMSSMDSALNRNAGIVVKNFY 353 Ilyobacter polytro...
ADZ78557  271 CPFIWMLPPMLYRVINPNLqgie--------aegaYMMMAQKVLPaGLVGLVLSGMISATASKANTTLNLVAVVFANDVY 342 Sphingobacterium s...
ACU05778  268 SPVLWMLPPMAYRVINPALsgld--------aenaYIMVCKQVLPaGLLGLMLTGMYFSTSASANTALNVVSAVFTNDIY 339 Pedobacter heparin...
NP_799597 272 GAVIWFIPPWASAILYPDAatqysslg-akasdavYLVFARETMPlGTVGLLMAGLFAATMSSMDSALNRNSGIFVRSFY 350 Vibrio parahaemoly...
EFS34002  292 TPLIWYLPTMIYRVMEPGLaldldattmtfngehaYVNMSKLVLMkGMVGMMLAAMLSATLSNVSGILNVYANVYTYDIW 371 Bacteroides sp. D2
ADE53852  283 TPFLWMAPPLIYRSINGDAdpq-----------esYILACKAVLPaGLIGLMVAAMFSATASSLSSIMNMFAGVLTDDVY 351 Coraliomargarita a...
Feature 1                                                                                     
NP_661868 375 KRFikre-aeqnHYVLMSRIVTAVTAIFalyit-fyvleTITGAWEFIIQCGAGTGFVLIMRWFWWRLNAW----SEITS 448 Chlorobium tepidum...
EDY85006  354 LPLirpn-asekELLMVGKVSTVAFGSGiifagiqfsqlKDIGLFDLMLQFGALVAIPMQVPLIWGILVKR----VPDWA 428 Verrucomicrobiae b...
AEL27536  342 QPLnpna--apkTLMKVARIATLLFGLGtigva--fmvpLAGGIVEVVLSIGAVTGGALYAPAIWGLFSKK----QTGSS 413 Cyclobacterium mar...
ACU61005  344 KALinpg-asdrQLIRVARLSGLLLGIGmigva--llvpAAGGMIEVVLSIAAITGGPSLLPPLWALFSKKl---TGKAA 417 Chitinophaga pinen...
ADO83902  354 LSVlkpe-ardeELLKVGKWLTLFFGLLiisvalilaslKNLSLFNATMYIGSLVAFPMLVPSLLGFFIKK----TPDWA 428 Ilyobacter polytro...
ADZ78557  343 KKIffpk-asdkTLVWVARVFTVLFGLLtmvia--ilipKVGGIVEMVLSTAAIAGGSLFAPLIWSLFSKK----QTAKS 415 Sphingobacterium s...
ACU05778  340 KGSvnpd-addkKLMFVARASSWFFGLLmivia--lgvpYIGGIVEFTLSVGALTGGPLLLPPIWSLFSKR----LSGKA 412 Pedobacter heparin...
NP_799597 351 SNIvrkgqasdkELLRAGQIACLVNGILvimmaqffnslKHLSLFDLMMQVATLLQSPILVPLFLGIIIRR----TPKWA 426 Vibrio parahaemoly...
EFS34002  372 GHKeknrqadekKRIKVGRLFTFVFGLViials--mfipFAGGAEKVVVTLLTMVMCPLYIPSIWGLFSKRltgnQLITA 449 Bacteroides sp. D2
ADE53852  352 RKRirph-ateaESVKVGRIFTLLIGVYmlaga--lilpRLGNYRDIVILVGSLIGSSVLLPTLWALFSKRvgkeVVWWT 428 Coraliomargarita a...
Feature 1                                                                                     
NP_661868 449 MVAPIVAYSYInqft-------------tivfPESi-YIIVLFTITCTLAVTWL------------------------TK 490 Chlorobium tepidum...
EDY85006  429 SWVTIVVGLCVsfvvkvwmtpewiegilgldtPFSg-RESSDLSLILGVVINLTv----------------------gSA 485 Verrucomicrobiae b...
AEL27536  414 ILVVTGLSLLInlffkf---------ispalfSFAl-GRSSEMIVGVFLPIALLaf--------------------yeIF 463 Cyclobacterium mar...
ACU61005  418 YIISGASLLVNl--------------------LFKl-LVPALTTLKLSRSEEMLlg---------------------vGL 455 Chitinophaga pinen...
ADO83902  429 PWATIAVGIVVsyiagvvltpeivektlglstPFSg-REASDLKVVLGIAGHIFi-----------------------TG 484 Ilyobacter polytro...
ADZ78557  416 IVFASIVSLVVsiwmkigap---fimgirldrFLEt-CLGVGLPLAILALFELInrkq-----------------hyaAF 474 Sphingobacterium s...
ACU05778  413 TIYITLISLSVnvvfkmiip---fidgyklsrANEm-LVGVLLPFFMLLIYEIVrrk-------------------tkVS 469 Pedobacter heparin...
NP_799597 427 PWATVVVGMFVswsvvkiftp-efvgswfgmdELTr-REAGEMRTMITIAAHLVf----------------------tAG 482 Vibrio parahaemoly...
EFS34002  450 MVLTWFVGIMArii----------------ipASVi-SPSIIESVSGCVLPVLIlvmmeiwsvrkkyedngyqaiceyTD 512 Bacteroides sp. D2
ADE53852  429 LFGGIGVSLVYk-------------------fGFKegGWFEGIAAFSGLMEFIAty--------------------srES 469 Coraliomargarita a...
Feature 1                             
NP_661868 491 PTDREKLh----aFYRTTRVGGAL 510 Chlorobium tepidum TLS
EDY85006  486 VYLGSSV------FYKEPNPTRKA 503 Verrucomicrobiae bacterium DG1235
AEL27536  464 ARGENVQ------FEQYKNYLGRN 481 Cyclobacterium marinum DSM 745
ACU61005  456 PFLLLLL------YEFVIAPTTAA 473 Chitinophaga pinensis DSM 2588
ADO83902  485 GFFLTTQl-----FFKGYKTEKRA 503 Ilyobacter polytropus DSM 2926
ADZ78557  475 SKKEESIh-----EYNERQDSVKQ 493 Sphingobacterium sp. 21
ACU05778  470 QDYENYL------VYKADKKQAAV 487 Pedobacter heparinus DSM 2366
NP_799597 483 FFCLSTL------FYKEETDTHKE 500 Vibrio parahaemolyticus RIMD 2210633
EFS34002  513 PDADREPts---kEKKAVRNYSHL 533 Bacteroides sp. D2
ADE53852  470 DLVVGVMaplvilLIAELRAKSDS 493 Coraliomargarita akajimensis DSM 45221

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