1U2C


Conserved Protein Domain Family
Dystroglycan_repeat

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cd11303: Dystroglycan_repeat 
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Cadherin-like repeat domain of alpha dystroglycan
Dystroglycan is a glycoprotein widely distributed in skeletal muscle and other tissues; the pre-protein is cleaved into two subunits (alpha and beta) that form a complex which links the extracellular matrix to the cytoskeleton. Cadherin-like dystroglycan repeats are present in the extracellular alpha-dystroglycan subunit, which binds to the alpha-2-laminin G-domain in the basement membrane as part of the dystrophin-dystroglycan-complex (DGC). DGC has been shown to interact with other etxtracellular matrix components as well, such as perlecan and m-agrin, suggesting that the complex may play various different roles depending on the extracellular ligand.
Statistics
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PSSM-Id: 206636
Aligned: 23 rows
Threshold Bit Score: 82.0237
Created: 16-Sep-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1U2C_A          3 PTVVGIPDGTAVVGRSFRVSIP--TDLIAss---------gEIIKVSAAGke------aLPSWLHWDPh----sHILEGL 61   house mouse
NP_725523     537 MPRNQVDRVNASLGQLLVYKVP--ADTFYd----------aNDNQLTLTLktrdhlelsPRHWLQFDSk----nEEFYGI 600  fruit fly
YP_003167916 5352 VAARTLADQSALVDSPFELHLP--GETFVdqd-------lgDVLSYSAAQdsd----eaLPAWLHFDPt----sRTFSGT 5414 Candidatus Ac...
P38928         28 YPIGKQYPPVARVNESFTFQIS--NDTYKss--------vdKTAQITYNCf-------dLPSWLSFDSs----sRTFSGE 86   Saccharomyces...
YP_528702     791 TVANAIPDQVAPDNEPFSFTFA--ANTFNda--------dgETLTYSAELkng----gaLPSWLSFDAn----tRTFSGT 852  Saccharophagu...
XP_001629936   24 KPIQRLYNVVAVVGRHFTYRVT--PTDGS------------KNFKITEEGkk------tLPHWLALDEs----tNTLEGV 79   starlet sea a...
AAH99987       71 SQPSGFPDSSAVVGRVFRLQVPi-KAKDSg-----------SIVKITEASkd------vLPAWLHWDAe----sGTLQGL 128  zebrafish
Q14118        498 ELKNHIDRVDAWVGTYFEVKIP--SDTFYdhedtt-tdklkLTLKLREQQlv------gEKSWVQFNSn----sQLMYGL 564  human
Q28686         21 GTEAQQTTLYPLVGRVFVHTLE--PASFLhlpehaapatipVTYHAHLQGhp------dLPRWLRYTQrsphhpGFLYGA 92   rabbit
CAG11285      147 AVHGDIPDSSAVVGQAFQLRIPsgPANGS------------CNIDLTEMGke------tLPSWLYWDQe----sCTLRGL 204  spotted green...
1U2C_A         62 PLDTDK----GVHYISVSAARlgang--------------shvpQTSSVFSIEVYPEDHNE 104  house mouse
NP_725523     601 PKSGDI----GSEEYLLVAEDsg-------------------glSAHDALVVVVSPAPKRD 638  fruit fly
YP_003167916 5415 PGKADV----GMLNVRVTASDrvg-----------------ataSSTFAVTIDKVNQAPLV 5454 Candidatus Accumulibacter phosph...
P38928         87 PSSDLLsdanTTLYFNVILEGtdsadstslnntyqfvvtnrpsiSLSSDFNLLALLKNYGY 147  Saccharomyces cerevisiae S288c
YP_528702     853 PATSDV----GTIEIRVTADDgnw------------------gtPAQDIFEIDVNDTNDDP 891  Saccharophagus degradans 2-40
XP_001629936   80 PSWRDK----GTYHLELHGHEt----------------------QHFKILVKDLNDIRSDL 114  starlet sea anemone
AAH99987      129 PLETDK----GVHYISVSVSNesk------------------vsQSPDVFSIEVHPEEHAE 167  zebrafish
Q14118        565 PDSSHV----GKHEYFMHATDkg-------------------glSAVDAFEIHVHRRPQGD 602  human
Q28686         93 ATPEDR----GRQVIEVTAYNrds------------------fdTAGQSLVLLIRDPEGSP 131  rabbit
CAG11285      205 ALEQDK----GVYHITASGEKtaekmvys--------edradtePALLMLHADGGGGAQPL 253  spotted green pufferfish
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