2FGH,2NUT,1SVY,3FG6,3FG6,1H1V,2VIK,1JHW,1H1V,1JHW


Conserved Protein Domain Family
gelsolin_like

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cd11280: gelsolin_like 
Click on image for an interactive view with Cn3D
Tandemly repeated domains found in gelsolin, severin, villin, and related proteins.
Gelsolin repeats occur in gelsolin, severin, villin, advillin, villidin, supervillin, flightless, quail, fragmin, and other proteins, usually in several copies. They co-occur with villin headpiece domains, leucine-rich repeats, and several other domains. These gelsolin-related actin binding proteins (GRABPs) play regulatory roles in the assembly and disassembly of actin filaments; they are involved in F-actin capping, uncapping, severing, or the nucleation of actin filaments. Severing of actin filaments is Ca2+ dependent. Villins are also linked to generating bundles of F-actin with uniform filament polarity, which is most likely mediated by their extra villin headpiece domain. Many family members have also adopted functions in the nucleus, including the regulation of transcription. Supervillin, gelsolin, and flightless I are involved in intracellular signaling via nuclear hormone receptors. The gelsolin-like domain is distantly related to the actin depolymerizing domains found in cofilin and similar proteins.
Statistics
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PSSM-Id: 200436
Aligned: 24 rows
Threshold Bit Score: 63.9262
Created: 17-Aug-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putative type 2
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: putative type 2 Ca binding site [ion binding site], 2 residue positions
Conserved feature residue pattern:D EClick to see conserved feature residue pattern help
Evidence:
  • Comment:Activated actin-bound gelsolin has eight Ca2+-binding sites: six type-2 sites, one in each sub-domain, and two type 1 sites, associated with the first and the fourth sub-domain.
  • Comment:not all members of this subfamily may bind calcium at this site
  • Structure:1SVY: the second sub-domain of Dictyostelium discoideum severin binds Ca2+ in a type 2 binding site
  • Structure:1H1V: the fourth sub-domain of rabbit gelsolin binds Ca2+ in a type 2 binding site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    #                                 
2FGH_A     511 STRLFQVRAsss--gaTRAVEIIPKag--------------aLNSNDAFVLKTPSAAYLWVGa----------------g 558  horse
2NUT_A     624 QPILYAYSFs------GPPEPVLLDss--------------sILADRILLMDTFFQILIYHGetiaqwrksgyqdmpeye 683  human
1SVY_A      12 KPRLLHISGdk----nAKVAEVPLAts--------------sLNSGDCFLLDAGLTIYQFNGs----------------k 57   Dictyostelium di...
NP_498913  928 DCYVFLCRYa-----vMPEEDEEGEd---------------eHDEDDKPEMDFKCVVYFWQGrd---------------a 972  nematode
NP_995968  599 KIYEYQDEAl------IPLEKFWGCipk-----------vdmLDTRKVLVFDFGSELYVWNGkn---------------a 646  fruit fly
NP_491442  338 LNLVLRIAG-------DNTAETCSRrerl---------syeiMKPSEVLIFDFGSEIYVWTGr----------------y 385  nematode
NP_567217  733 PRCLMHQEG-------GTFEELPAYdl--------------sMQSDKAVILDHGTDVFIWLGaels----------adev 781  thale cress
NP_003165 1136 TNCIYRLMDdklvpddDYWGKIPKCs---------------lLQPKEVLVFDFGSEVYVWHGk----------------e 1184 human
NP_525097  919 ECYVFLCRYc------IPIEEPENGsedganp----aadvskSSANNQPEDEIQCVVYFWQGrn---------------a 973  fruit fly
NP_002009  932 DCYVFLCRYwv----pVEYEEEEKKedkeekaegkegeeataEAEEKQPEEDFQCIVYFWQGre---------------a 992  human
Feature 1          #                                                               
2FGH_A     559 ASEAEKTGAQELLRVLr----------------------AQPVQVAEGSe----------pDSFWEAL 594  horse
2NUT_A     684 NFRHLLQAPVDDAQEIlhsr----------------fpmPRYIDTEHGGsq---------aRFLLSKV 726  human
1SVY_A      58 SSPQEKNKAAEVARAIdaer----------------kglPKVEVFXETDsd--------ipAEFWKLL 101  Dictyostelium discoideum
NP_498913  973 SNMGWLNFTFQLQPNFeeif----------------kdkLEVVRMYQQQe----------nHKFLSHF 1014 nematode
NP_995968  647 PSDAKRAAMRLAQEHFgaensad---------yadcylnPLNYVAIVGRrentkyakrcaqRPEWCVL 705  fruit fly
NP_491442  386 SNKVSSAYAQEYAKQLmkkpvkngkfilgdaesidqdgrPEWTLSRKIHqgv-------ldTLFKAKF 446  nematode
NP_567217  782 KSAAVLAACRTLAEELtefr----------------fpaPRILAFKEGSsq---------aRYFVCRL 824  thale cress
NP_003165 1185 VTLAQRKIAFQLAKHLwngtfdyenc----dinpldpgeCNPLIPRKGQg-----------RPDWAIF 1237 human
NP_525097  974 GNMGWLTFTFTLQKKFkamf----------------geeLEVVRIFQQQe----------nLKFMSHF 1015 fruit fly
NP_002009  993 SNMGWLTFTFSLQKKFeslf----------------pgkLEVVRMTQQQe----------nPKFLSHF 1034 human

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