2UZX,2UZY,1SHY


Conserved Protein Domain Family
Sema_MET

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cd11278: Sema_MET 
Click on image for an interactive view with Cn3D
The Sema domain, a protein interacting module, of MET (also called hepatocyte growth factor receptor, HGFR)
MET is encoded by the c-met protooncogene. MET is a receptor tyrosine kinase that binds its ligand, hepatocyte growth factor/scatter factor (HGF/SF). HGF/SF and MET are essential for the development of several tissues and organs, including the placenta, liver, and several groups of skeletal muscles. It also plays a major role in the abnormal migration of cancer cells as a result of overexpression or MET mutations. MET is composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a Sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic tyrosine kinase domain. The cytoplasmic C-terminal region acts as a docking site for multiple protein substrates, including Grb2, Gab1, STAT3, Shc, SHIP-1 and Src. The Sema domain is located at the N-terminus and contains four disulfide bonds formed by eight conserved cysteine residues. The Sema domain of Met is necessary for receptor dimerization and activation.
Statistics
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PSSM-Id: 200539
Aligned: 7 rows
Threshold Bit Score: 959.32
Created: 7-Apr-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
HGF bindingInlB binding
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:HGF binding site [polypeptide binding site]
Evidence:
  • Comment:MET serves as the receptor for hepatocyte growth factor (HGF).
  • Structure:1SHY; Human MET sema domain binds HGF-beta chain, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2UZX_B          4 ECKEALAKSEMNVNMKCQLPNFTAETPIQNVILHEHHIFLGATNYIYVLNEeDLQKVAEYKTGPVLEHPDCFPCQDCSSK 83   human
Q90975         25 QCKEAAKKSEMNLNVKYDLPNFITETPIQNVVLYKHHVYIGAVNKIYVLNE-TLQNISVYKTGPILESPGCAPCEDCKDK 103  chicken
XP_002935001   21 QCEEAAKMAEMDLNIKHNLQSFTTDTPIQNIIMFKGYIYVGAVNKIYVLNE-NLTKVSEYKTGPLLVHSHCLPCKNCTDN 99   western clawe...
NP_001079029   21 QCEEAAKMAEMDLNLKLNLQNFTTDTPIQSIIMFKGYVYVGAVNKIYVLNE-NLTKISEYKTGPLLKHSDCLPCKNCTDN 99   African clawe...
XP_003221263   25 KCKEAVSRLEMNWNVKYHLPNFTAETPIQNIVLYKNHFYVGAINKIYVLNE-SLHSVSVYKTGPVLENPDCVPCTECAPR 103  green anole
2UZY_B          4 ECKEALAKSEMNVNMKCQLPNFTAETPIQNVILHEHHIFLGATNYIYVLNEeDLQKVAEYKTGPVLEHPDCFPCQDCSSK 83   human
1SHY_B          1 ECKEALAKSEMNVNMKYQLPNFTAETPIQNVILHEHHIFLGATNYIYVLNEeDLQKVAEYKTGPVLEHPDCFPCQDCSSK 80   human
Feature 1                            ####                    #                  #                 
2UZX_B         84 ANLSGGVWKDNINMALVVDTYYDDQLISCGSVNRGTCQRHVFPHNHTADIQSEVHCIFSPQIE-EPSQCPDCVVSALGAK 162  human
Q90975        104 ANLSNSVWKDNVNMALLLETYYDDQLISCGSVSGGVCHRHIIPPDNPADIESEVHCMYSPQVDgEADNCPDCVVSTLGTK 183  chicken
XP_002935001  100 FLSPNGTWKDNVNMALFVEDFYDDQLISCGNIRRGECQRHTLHSDKPWDIASNVHCLYSSQMIeDKDNCPDCIVSTTGSK 179  western clawe...
NP_001079029  100 LLSPNGTWKDSVNMALFVQDFYDDQLISCGNIRKGECQRHTLHSDKPWDIASDVHCLYSSQMVeDKDSCPDCIVSTAGSK 179  African clawe...
XP_003221263  104 LNQSENIWKDNKNMALFLETYYDHQLISCGSAAKGTCQRHVIHPSNPADIQSDVHCMYSKQVDeESDQCPDCVVSPLGSK 183  green anole
2UZY_B         84 ANLSGGVWKDNINMALVVDTYYDDQLISCGSVNRGTCQRHVFPHNHTADIQSEVHCIFSPQIE-EPSQCPDCVVSALGAK 162  human
1SHY_B         81 ANLSGGVWKDNINMALVVDTYYDDQLISCGSVNRGTCQRHVFPHNHTADIQSEVHCIFSPQIE-EPSQCPDCVVSALGAK 159  human
Feature 1               ###                         # ####     ##                                 
2UZX_B        163 VLSSVKDRFINFFVGNTINSsyfPDHPLHSISVRRLKETKDGFMFLTDQSYIDVLPEFRDSYPIKYVHAFESNNFIYFLT 242  human
Q90975        184 VLVTEKDRFVNFFVGNTMTSafqPPHVLHSISVRRLKETQDGFEFLTDQSYIDILPQFRDSYPIKYVHAFEHDHFVYFLT 263  chicken
XP_002935001  180 ILVTVRDRFVKFFVGSTLTG---QPSTIHSVSVRRLKETQDGFEYLTDQSYIDVLPQLRDIYPIKYIYTFESNNFVYFLT 256  western clawe...
NP_001079029  180 ILVTVGDRFVKFFVGSTLTG---QPSTIHSVSVRRLKETQDGFEYLTDQSYIDVLPHLRDIYPIRYIYTFESNNFVYFLT 256  African clawe...
XP_003221263  184 VLVTEKERFVYFYVGNTVNNssqQDHLLHSVSVRRLKETLDGFEFLTLYSYIDVLPEFRNSYPIKYIHAFEKDHFVYFLT 263  green anole
2UZY_B        163 VLSSVKDRFINFFVGNTINSsyfPDHPLHSISVRRLKETKDGFMFLTDQSYIDVLPEFRDSYPIKYVHAFESNNFIYFLT 242  human
1SHY_B        160 VLSSVKDRFINFFVGNTINSsyfPDHPLHSISVRRLKETKDGFMFLTDQSYIDVLPEFRDSYPIKYVHAFESNNFIYFLT 239  human
Feature 1                               #                                                         
2UZX_B        243 VQRETLDAQTFHTRIIRFCSINSGLHSYMEMPLECILTEKRKKRS--TKKEVFNILQAAYVSKPGAQLARQIGasLNDDI 320  human
Q90975        264 VQRESLDSQTFHTRIIRFCTLDSEMRSYMEMPLECIFTEKRRKRS--IRKEVFNILQAAYVSKPGAALAHEMGlgLIDDI 341  chicken
XP_002935001  257 VQRESIDSQAYHTRIVRVCSSDSELRSYIEMPLECIFTEKRRKRS--TAGAVFNILQAAYLGRAGEDLAEEMGvkPDDDI 334  western clawe...
NP_001079029  257 VQRESLDSQAYHTRIVRICSSDSELRSYIEMPLECIFTEKRRKRS--TASAVFNIVQAAYLGRAGEDLAEEMGvkPDDDI 334  African clawe...
XP_003221263  264 VQRESLDSQAFHTRIIRFCSFDSELRSYMEMPLECIYTEKRKKRStkQSNEVFNLLQAAYIGKPGAALAQEMGldVNDDV 343  green anole
2UZY_B        243 VQRETLDAQTFHTRIIRFCSINSGLHSYMEMPLECILTEKRKKRS--TKKEVFNILQAAYVSKPGAQLARQIGasLNDDI 320  human
1SHY_B        240 VQRETLDAQTFHTRIIRFCSINSGLHSYMEMPLECILTELVPRGS--TKKEVFNILQAAYVSKPGAQLARQIGasLNDDI 317  human
Feature 1                                                                                         
2UZX_B        321 LFAVFAQSKPdSAEPMDRSAMCAFPIKYVNDFFNKIVNKNNVRCLQHFYGPNHEHCfnr-tllRNSSGCEARRDEYRTEF 399  human
Q90975        342 LYGVFAQTNQiPQEPTNRSAVCAVSVRTINEFFNKIVDKQNMKCLQHFYGKDSKYClnr-afsRNASYCRAQDDEYRLEV 420  chicken
XP_002935001  335 LYAVFAQSKLdSSEANNRSAVCAVSVKTINEFFNNAADKQNTKCLEHFYEKDNRLCinnkkflRNASYCSTPIDEYRVEV 414  western clawe...
NP_001079029  335 LYGVFAQSKPdSPEPNNRSAVCAVSVKTINEFFNSAADKQNTKCLEHFYGKDNRLCinnkrflRNASHCSTPIDEYRVEV 414  African clawe...
XP_003221263  344 LFGAFAQSKPdSSEPTHKSAVCAVAIKTINEFFGKIVDKQNMKCLQHLYEKNSKYClnr-tfsRNTTYCGEQDEEYRVEV 422  green anole
2UZY_B        321 LFAVFAQSKPdSAEPMDRSAMCAFPIKYVNDFFNKIVNKNNVRCLQHFYGPNHEHCfnr-tllRNSSGCEARRDEYRTEF 399  human
1SHY_B        318 LFGVFAQSKPdSAEPMDRSAMCAFPIKYVNDFFNKIVNKNNVRCLQHFYGPNHEHCfnr-tllRNSSGCEARRDEYRTEF 396  human
Feature 1                                                                                         
2UZX_B        400 TTALQRVDLFMGQFSEVLLTSISTFIKGDLTIANLGTSEGRFMQVVVSRSGPstPHVNFLLDSHPVSPEVIVEHtlnqNG 479  human
Q90975        421 TTPLQRVDLFMGQFNNILLTSISVFTKGNLTIANLGTSEGRFMQIVVSRSEPtaPHVSFQLDSHAVSPQVVVEQsaaaDG 500  chicken
XP_002935001  415 TTVLRRLDLFMDQFRNVLLTSISVFTQGRLTIANLGTSEGRFMQVVISRTGQpkPHVNFLLEPRPVSPEVVINPaseeSG 494  western clawe...
NP_001079029  415 TTVLRRLDLFMDQFRNVLLTSISVFTQGRLTIANLGTSEGRFMQVIISRTGQpkPHVNFLLEARPISPEIVINTaseeSG 494  African clawe...
XP_003221263  423 TTALQRIDLFPEQFNTVLLTSISVFTKGHLTIANLGTSGGRFMQIVISRSERttPHVNFHLDFQPVSPEVIIENlpgkDG 502  green anole
2UZY_B        400 TTALQRVDLFMGQFSEVLLTSISTFIKGDLTIANLGTSEGRFMQVVVSRSGPstPHVNFLLDSHPVSPEVIVEHtlnqNG 479  human
1SHY_B        397 TTALQRVDLFMGQFSEVLLTSISTFIKGDLTIANLGTSEGRFMQVVVSRSGPstPHVNFLLDSHPVSPEVIVEHtlnqNG 476  human
Feature 1                         
2UZX_B        480 YTLVITGkKITKIPLN 495  human
Q90975        501 YTLVVTGkKITKVPLN 516  chicken
XP_002935001  495 YTLVNTGmQLTKVPLV 510  western clawed frog
NP_001079029  495 YTLVNTGmQIIKVPLV 510  African clawed frog
XP_003221263  503 YMLAITGkRITKIPLN 518  green anole
2UZY_B        480 YTLVITGkKITKIPLN 495  human
1SHY_B        477 YTLVITGkKITKIPLN 492  human

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