Conserved Protein Domain Family
Sema_7A

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cd11243: Sema_7A 
The Sema domain, a protein interacting module, of semaphorin 7A (Sema7A, also called CD108)
Sema7A plays regulatory roles in both immune and nervous systems. Unlike other semaphorins, which act as repulsive guidance cues, Sema7A enhances central and peripheral axon growth and is required for proper axon tract formation during embryonic development. Sema7A also plays a critical role in the negative regulation of T cell activation and function. Sema7A is a membrane-anchored member of the semaphorin family of proteins. Semaphorins are regulatory molecules in the development of the nervous system and in axonal guidance. They also play important roles in other biological processes, such as angiogenesis, immune regulation, respiration systems and cancer. The Sema domain is located at the N-terminus and contains four disulfide bonds formed by eight conserved cysteine residues. It serves as a receptor-recognition and -binding module.
Statistics
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PSSM-Id: 200504
Aligned: 4 rows
Threshold Bit Score: 669.63
Created: 6-Jun-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative plexinputative
Feature 1:putative plexin binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of semaphorins 6A and 4D to their receptor plexins A2 and B1, respectively

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                            ####                        
O75326        72 TEPHTVLFHEpgsssVWVGGRGKVYLFDFpeGKNASVRtvn---igsTKGSCLDKR-----DCENYITLLERRseGLLAC 143 human
NP_001186678  47 NEKYPVFYHEtnsssIYVGGEGMLYYYNFatSETYSVEfp-----veNGAQCLKPGsp--eDNKNFITLIAKHgnKMLVC 119 chicken
XP_003230383   9 KDSPKPMFHEagsnqVLIGGQGALWLLTFt-GSAVIQKkiplkadekAEKDCKKRAtlgedDCENTIRLIKKLdyRIMVC 87  green anole
XP_002937527  38 KQRYPVFYLYsp-dkLYVGGTNILYLLDF--TTKEINK---------TAIHLKDCT-----DCMIYVTLAGQLnrSLIIC 100 western clawed ...
Feature 1                                       ##   #                    # ##      #      #  ## 
O75326       144 GTNArhPSCWNLvngtv--------vplgeMRGYAPFSPDENSLVLFEgdeVYSTIRKQEYngkiPRFRRIRgESELYTS 215 human
NP_001186678 120 GTGAcnPTCWHLaekek--------espqdGRGLAPFTPDTNSLVIVDypnIYSTIKKSQQngkiPRFRRVKgDGELYTS 191 chicken
XP_003230383  88 GTNAgsPKCWFLvnqtlqqdkeghvvtlsaDNIVPPLLSQEAVAVAIEg-nLYSAVSGKKG----MIQRSYGtKKGIKTE 162 green anole
XP_002937527 101 GTSGtrTACWKLeenki--------qqyslPEEFVPRMPENNNLVLIIeneVYSTNNGRRDk--yIFKKIYGqQPFLYTG 170 western clawed ...
Feature 1        #    #                           #                       #### # #               
O75326       216 DTVMQNPQFIKATIVHqdqaydDKIYYFFREDNPDKnPEAPLNVSRVAQLCRGDQGGESSLsVSKWNTFLKAMLVCSDAa 295 human
NP_001186678 192 DTVMQNPQFVKATTLRheepyqDKIYYFFREDNPDKsPEAPRNISRVAQLCKEDKGGTSSLsASKWTTFLKASLICVDPa 271 chicken
XP_003230383 163 DSWLAKSEFVGAALLPeddqrkDEIFFFYNDVNESAgLDKEPYRAHLGRVCKVDQGGKPIL-TDSWSTFLKARLVCGHPn 241 green anole
XP_002937527 171 DGFMRKPHYIKALVVDskekyqDKILLFFREDNENV-RSTEKRISMVARMCKEDSGPTKLSsYYMFSTALKSRLICGYPk 249 western clawed ...
Feature 1                                                                                        
O75326       296 TNKNFNRLQDVFLLpdpsgqwrdTRVYGVFSNPWNYSAVCVYSLGDIDKVFRTSSLKGyhssLPNPRPGKCLPDQQPIp- 374 human
NP_001186678 272 TKGNFNWLQDVFFVpasn--wrdSKVYGLFTNTWGSSAVCVYSFGDIDNVFRTSKLKGyngpNPEIKPGQCVPSGQHTp- 348 chicken
XP_003230383 242 EPMRFHRLRGAFVFrkee--kgeAVLYGVFSSTWGSSAVCSYSMKRVSSLFKTSGFKGfsgsLPNPRPGTCVPPESTHll 319 green anole
XP_002937527 250 KGQYFPHLQDVFLLkgk----eeNLIYGLFTNAWNHSAVCSYNLLDIEKTFSSSSLWNapasNLAIRPGTCILGDRTP-- 323 western clawed ...
Feature 1         #   #  #                                                                       
O75326       375 -TETFQVADRHPEVAQRVEpmgplkTPLFHSKYHYQKVAVHrmqashgetFHVLYLTTDRGTIHKVVepgeqehsfafnI 453 human
NP_001186678 349 -SETFKIADSHPEVEDRVEplaptrSPLFHNKHRYQKIGVHevsasdgrqYTVLYLATDKGSIHKVVelpg----gvhnI 423 chicken
XP_003230383 320 pSRTLSFIKEHPELDVVIYpdeerpLYVLQNNDTYTHVVVDqvrdasnvsYDVLYLGTAKGKIHKVLrskd----qtviI 395 green anole
XP_002937527 324 -EDTFNRASKYPELQDWIEps--gkEAVFQNLSHYRKIVVDevkaldgnsYRVILLAAGGSVQKLVVmdng-----dhsV 395 western clawed ...
Feature 1                                              
O75326       454 MEIQPFRraAAIQTMSLDAerrKLYVSSqWEVSQVPLD 491 human
NP_001186678 424 MELQVFSkkDPIQSMILDHeraMLYVGStSKVVEIPMD 461 chicken
XP_003230383 396 AEISPFKeqEPISSMILDAstsHLFADTkAEVTRLPLA 433 green anole
XP_002937527 396 HMINPFNetKEILSLILEPtmhVLYVGTnTEVIRLPLD 433 western clawed frog

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